X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fmath%2FMatrix.java;h=f9abbda2f7bc5ea85bad05af2882cefe478a6523;hb=d61d08aa6049a77d60d83a52cabc355c7c39ae62;hp=81d520abcf557b5e513580780a1190ed384f1f1d;hpb=efc31b4a8d5cee63555586804a2b79c06bdb5a14;p=jalview.git

diff --git a/src/jalview/math/Matrix.java b/src/jalview/math/Matrix.java
index 81d520a..f9abbda 100755
--- a/src/jalview/math/Matrix.java
+++ b/src/jalview/math/Matrix.java
@@ -804,13 +804,13 @@ public class Matrix
         //symm.print(System.out);
         //System.out.println();
         // Copy the symmetric matrix for later
-        Matrix origsymm = symm.copy();
+        //Matrix origsymm = symm.copy();
 
         // This produces the tridiagonal transformation matrix
-        long tstart = System.currentTimeMillis();
+        //long tstart = System.currentTimeMillis();
         symm.tred();
 
-        long tend = System.currentTimeMillis();
+        //long tend = System.currentTimeMillis();
 
         //System.out.println("Time take for tred = " + (tend-tstart) + "ms");
         //System.out.println(" ---Tridiag transform matrix ---");
@@ -823,9 +823,9 @@ public class Matrix
         //symm.printE(System.out);
         //System.out.println();
         // Now produce the diagonalization matrix
-        tstart = System.currentTimeMillis();
+        //tstart = System.currentTimeMillis();
         symm.tqli();
-        tend = System.currentTimeMillis();
+        //tend = System.currentTimeMillis();
 
         //System.out.println("Time take for tqli = " + (tend-tstart) + " ms");
         //System.out.println(" --- New diagonalization matrix ---");