X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fmath%2FSparseMatrix.java;h=e24cda5b4a84df3dff4b6b4a72e8ce80d71e2c27;hb=72943d968f678ca4e34f1b701823d6dab51ff3a2;hp=98d31c514d8a66101ff7b15593507ee9af8071a4;hpb=3d0101179759ef157b088ea135423cd909512d9f;p=jalview.git diff --git a/src/jalview/math/SparseMatrix.java b/src/jalview/math/SparseMatrix.java index 98d31c5..e24cda5 100644 --- a/src/jalview/math/SparseMatrix.java +++ b/src/jalview/math/SparseMatrix.java @@ -1,3 +1,23 @@ +/* + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + */ package jalview.math; import jalview.ext.android.SparseDoubleArray; @@ -25,11 +45,8 @@ public class SparseMatrix extends Matrix */ public SparseMatrix(double[][] v) { - rows = v.length; - if (rows > 0) - { - cols = v[0].length; - } + super(v.length, v.length > 0 ? v[0].length : 0); + sparseColumns = new SparseDoubleArray[cols]; /*