X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fproject%2FJalview2XML.java;fp=src%2Fjalview%2Fproject%2FJalview2XML.java;h=cc20fce9c65c89dbb307280c4fe3ebea104e5abb;hb=e01607350af890d576dc27e0f075e1c64a8763a1;hp=af3b2c8e4ba5df144d5452c4c53bc17092895ec1;hpb=ca160187a050f6d4e50158cd5b51f75c83a7179e;p=jalview.git

diff --git a/src/jalview/project/Jalview2XML.java b/src/jalview/project/Jalview2XML.java
index af3b2c8..cc20fce 100644
--- a/src/jalview/project/Jalview2XML.java
+++ b/src/jalview/project/Jalview2XML.java
@@ -631,7 +631,7 @@ public class Jalview2XML
    */
   public void saveState(JarOutputStream jout)
   {
-    AlignFrame[] frames = Desktop.getAlignFrames();
+    AlignFrame[] frames = Desktop.getDesktopAlignFrames();
 
     setStateSavedUpToDate(true);
 
@@ -6919,7 +6919,7 @@ public class Jalview2XML
     if (stateSavedUpToDate()) // nothing happened since last project save
       return true;
 
-    AlignFrame[] frames = Desktop.getAlignFrames();
+    AlignFrame[] frames = Desktop.getDesktopAlignFrames();
     if (frames != null)
     {
       for (int i = 0; i < frames.length; i++)