X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Frenderer%2FContactMapRenderer.java;h=7a052da6e6d6e0d07d98de38e15d2905e3280277;hb=b4940c3adf6345861921c7abdf948e0a0c9beb61;hp=c4f308e3572564debd3074a31cb7f88f4319a913;hpb=4bc1cd2cbab7e95e770abb5c438f2c054d0a432d;p=jalview.git

diff --git a/src/jalview/renderer/ContactMapRenderer.java b/src/jalview/renderer/ContactMapRenderer.java
index c4f308e..7a052da 100644
--- a/src/jalview/renderer/ContactMapRenderer.java
+++ b/src/jalview/renderer/ContactMapRenderer.java
@@ -50,6 +50,12 @@ public class ContactMapRenderer implements AnnotationRowRendererI
       {
         column = hiddenColumns.visibleToAbsoluteColumn(column);
       }
+      // // TODO: highlight columns selected
+      // boolean colsel = false;
+      // if (columnSelection != null)
+      // {
+      // colsel = columnSelection.contains(column);
+      // }
 
       if (column > aaMax)
       {
@@ -103,6 +109,13 @@ public class ContactMapRenderer implements AnnotationRowRendererI
         // also need a 'getMaxPosForRange(start,end)' to accurately render
         Color col = getColorForRange(min, max, contacts, cstart, cend);
 
+        // TODO: show selected region
+        // if (colsel || columnSelection!=null &&
+        // columnSelection.intersects(cstart,cend))
+        // {
+        // g.setColor(col.brighter());
+        // }
+        // else
         {
           g.setColor(col);
         }