X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Frenderer%2Fseqfeatures%2FFeatureRenderer.java;h=73399cc480a92b793ab48646017e1e90d36d4399;hb=3ed1950a0283cbf7f312f58d9aabbbd21abfa4a8;hp=6687e6aaa64f1ec5fdc3918e2c7522c8c345558a;hpb=9bcdd1d38988de350482acfd1a21628f73cdbd6d;p=jalview.git

diff --git a/src/jalview/renderer/seqfeatures/FeatureRenderer.java b/src/jalview/renderer/seqfeatures/FeatureRenderer.java
index 6687e6a..73399cc 100644
--- a/src/jalview/renderer/seqfeatures/FeatureRenderer.java
+++ b/src/jalview/renderer/seqfeatures/FeatureRenderer.java
@@ -211,11 +211,6 @@ public class FeatureRenderer extends FeatureRendererModel
   @Override
   public Color findFeatureColour(SequenceI seq, int column, Graphics g)
   {
-    if (!av.isShowSequenceFeatures())
-    {
-      return null;
-    }
-
     // column is 'base 1' but getCharAt is an array index (ie from 0)
     if (Comparison.isGap(seq.getCharAt(column - 1)))
     {
@@ -304,7 +299,10 @@ public class FeatureRenderer extends FeatureRendererModel
       List<SequenceFeature> overlaps = seq.getFeatures().findFeatures(
               visiblePositions.getBegin(), visiblePositions.getEnd(), type);
 
-      // filterFeaturesForDisplay(overlaps, fc);
+      if (fc.isSimpleColour())
+      {
+        filterFeaturesForDisplay(overlaps);
+      }
 
       for (SequenceFeature sf : overlaps)
       {