X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2FAnnotationElement.java;h=250719721779ee9fb115b447beaf8c2ea45adbfe;hb=def10fb2252c67e8256ec1fddc6605e34d760c63;hp=57c0b2c4aad6a2da8f51820d75100c252401cf4a;hpb=7bc226b58110fa26d9dbd3f0c78095d06909ffc3;p=jalview.git

diff --git a/src/jalview/schemabinding/version2/AnnotationElement.java b/src/jalview/schemabinding/version2/AnnotationElement.java
index 57c0b2c..2507197 100755
--- a/src/jalview/schemabinding/version2/AnnotationElement.java
+++ b/src/jalview/schemabinding/version2/AnnotationElement.java
@@ -1,5 +1,5 @@
 /*
- * This class was automatically generated with
+ * This class was automatically generated with 
  * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML
  * Schema.
  * $Id$
@@ -7,353 +7,353 @@
 
 package jalview.schemabinding.version2;
 
-//---------------------------------/
-//- Imported classes and packages -/
+  //---------------------------------/
+ //- Imported classes and packages -/
 //---------------------------------/
 
-import org.exolab.castor.xml.*;
+import java.io.IOException;
+import java.io.Reader;
+import java.io.Serializable;
+import java.io.Writer;
+import org.exolab.castor.xml.MarshalException;
+import org.exolab.castor.xml.Marshaller;
+import org.exolab.castor.xml.Unmarshaller;
+import org.exolab.castor.xml.ValidationException;
+import org.xml.sax.ContentHandler;
 
 /**
  * Class AnnotationElement.
- *
+ * 
  * @version $Revision$ $Date$
  */
-public class AnnotationElement
-    implements java.io.Serializable
-{
-
-  //--------------------------/
-  //- Class/Member Variables -/
-  //--------------------------/
-
-  /**
-   * Field _position
-   */
-  private int _position;
-
-  /**
-   * keeps track of state for field: _position
-   */
-  private boolean _has_position;
-
-  /**
-   * Field _colour
-   */
-  private int _colour;
-
-  /**
-   * keeps track of state for field: _colour
-   */
-  private boolean _has_colour;
-
-  /**
-   * Field _displayCharacter
-   */
-  private java.lang.String _displayCharacter;
-
-  /**
-   * Field _description
-   */
-  private java.lang.String _description;
-
-  /**
-   * Field _secondaryStructure
-   */
-  private java.lang.String _secondaryStructure;
-
-  /**
-   * Field _value
-   */
-  private float _value;
-
-  /**
-   * keeps track of state for field: _value
-   */
-  private boolean _has_value;
-
-  //----------------/
-  //- Constructors -/
-  //----------------/
-
-  public AnnotationElement()
-  {
-    super();
-  } //-- jalview.schemabinding.version2.AnnotationElement()
-
-  //-----------/
-  //- Methods -/
-  //-----------/
-
-  /**
-   * Method deleteColour
-   *
-   */
-  public void deleteColour()
-  {
-    this._has_colour = false;
-  } //-- void deleteColour()
-
-  /**
-   * Method deletePosition
-   *
-   */
-  public void deletePosition()
-  {
-    this._has_position = false;
-  } //-- void deletePosition()
-
-  /**
-   * Method deleteValue
-   *
-   */
-  public void deleteValue()
-  {
-    this._has_value = false;
-  } //-- void deleteValue()
-
-  /**
-   * Returns the value of field 'colour'.
-   *
-   * @return int
-   * @return the value of field 'colour'.
-   */
-  public int getColour()
-  {
-    return this._colour;
-  } //-- int getColour()
-
-  /**
-   * Returns the value of field 'description'.
-   *
-   * @return String
-   * @return the value of field 'description'.
-   */
-  public java.lang.String getDescription()
-  {
-    return this._description;
-  } //-- java.lang.String getDescription()
-
-  /**
-   * Returns the value of field 'displayCharacter'.
-   *
-   * @return String
-   * @return the value of field 'displayCharacter'.
-   */
-  public java.lang.String getDisplayCharacter()
-  {
-    return this._displayCharacter;
-  } //-- java.lang.String getDisplayCharacter()
-
-  /**
-   * Returns the value of field 'position'.
-   *
-   * @return int
-   * @return the value of field 'position'.
-   */
-  public int getPosition()
-  {
-    return this._position;
-  } //-- int getPosition()
-
-  /**
-   * Returns the value of field 'secondaryStructure'.
-   *
-   * @return String
-   * @return the value of field 'secondaryStructure'.
-   */
-  public java.lang.String getSecondaryStructure()
-  {
-    return this._secondaryStructure;
-  } //-- java.lang.String getSecondaryStructure()
-
-  /**
-   * Returns the value of field 'value'.
-   *
-   * @return float
-   * @return the value of field 'value'.
-   */
-  public float getValue()
-  {
-    return this._value;
-  } //-- float getValue()
-
-  /**
-   * Method hasColour
-   *
-   *
-   *
-   * @return boolean
-   */
-  public boolean hasColour()
-  {
-    return this._has_colour;
-  } //-- boolean hasColour()
-
-  /**
-   * Method hasPosition
-   *
-   *
-   *
-   * @return boolean
-   */
-  public boolean hasPosition()
-  {
-    return this._has_position;
-  } //-- boolean hasPosition()
-
-  /**
-   * Method hasValue
-   *
-   *
-   *
-   * @return boolean
-   */
-  public boolean hasValue()
-  {
-    return this._has_value;
-  } //-- boolean hasValue()
-
-  /**
-   * Method isValid
-   *
-   *
-   *
-   * @return boolean
-   */
-  public boolean isValid()
-  {
-    try
+public class AnnotationElement implements java.io.Serializable {
+
+
+      //--------------------------/
+     //- Class/Member Variables -/
+    //--------------------------/
+
+    /**
+     * Field _position
+     */
+    private int _position;
+
+    /**
+     * keeps track of state for field: _position
+     */
+    private boolean _has_position;
+
+    /**
+     * Field _colour
+     */
+    private int _colour;
+
+    /**
+     * keeps track of state for field: _colour
+     */
+    private boolean _has_colour;
+
+    /**
+     * Field _displayCharacter
+     */
+    private java.lang.String _displayCharacter;
+
+    /**
+     * Field _description
+     */
+    private java.lang.String _description;
+
+    /**
+     * Field _secondaryStructure
+     */
+    private java.lang.String _secondaryStructure;
+
+    /**
+     * Field _value
+     */
+    private float _value;
+
+    /**
+     * keeps track of state for field: _value
+     */
+    private boolean _has_value;
+
+
+      //----------------/
+     //- Constructors -/
+    //----------------/
+
+    public AnnotationElement() {
+        super();
+    } //-- jalview.schemabinding.version2.AnnotationElement()
+
+
+      //-----------/
+     //- Methods -/
+    //-----------/
+
+    /**
+     * Method deleteColour
+     * 
+     */
+    public void deleteColour()
+    {
+        this._has_colour= false;
+    } //-- void deleteColour() 
+
+    /**
+     * Method deletePosition
+     * 
+     */
+    public void deletePosition()
+    {
+        this._has_position= false;
+    } //-- void deletePosition() 
+
+    /**
+     * Method deleteValue
+     * 
+     */
+    public void deleteValue()
+    {
+        this._has_value= false;
+    } //-- void deleteValue() 
+
+    /**
+     * Returns the value of field 'colour'.
+     * 
+     * @return int
+     * @return the value of field 'colour'.
+     */
+    public int getColour()
+    {
+        return this._colour;
+    } //-- int getColour() 
+
+    /**
+     * Returns the value of field 'description'.
+     * 
+     * @return String
+     * @return the value of field 'description'.
+     */
+    public java.lang.String getDescription()
+    {
+        return this._description;
+    } //-- java.lang.String getDescription() 
+
+    /**
+     * Returns the value of field 'displayCharacter'.
+     * 
+     * @return String
+     * @return the value of field 'displayCharacter'.
+     */
+    public java.lang.String getDisplayCharacter()
+    {
+        return this._displayCharacter;
+    } //-- java.lang.String getDisplayCharacter() 
+
+    /**
+     * Returns the value of field 'position'.
+     * 
+     * @return int
+     * @return the value of field 'position'.
+     */
+    public int getPosition()
+    {
+        return this._position;
+    } //-- int getPosition() 
+
+    /**
+     * Returns the value of field 'secondaryStructure'.
+     * 
+     * @return String
+     * @return the value of field 'secondaryStructure'.
+     */
+    public java.lang.String getSecondaryStructure()
+    {
+        return this._secondaryStructure;
+    } //-- java.lang.String getSecondaryStructure() 
+
+    /**
+     * Returns the value of field 'value'.
+     * 
+     * @return float
+     * @return the value of field 'value'.
+     */
+    public float getValue()
+    {
+        return this._value;
+    } //-- float getValue() 
+
+    /**
+     * Method hasColour
+     * 
+     * 
+     * 
+     * @return boolean
+     */
+    public boolean hasColour()
+    {
+        return this._has_colour;
+    } //-- boolean hasColour() 
+
+    /**
+     * Method hasPosition
+     * 
+     * 
+     * 
+     * @return boolean
+     */
+    public boolean hasPosition()
+    {
+        return this._has_position;
+    } //-- boolean hasPosition() 
+
+    /**
+     * Method hasValue
+     * 
+     * 
+     * 
+     * @return boolean
+     */
+    public boolean hasValue()
+    {
+        return this._has_value;
+    } //-- boolean hasValue() 
+
+    /**
+     * Method isValid
+     * 
+     * 
+     * 
+     * @return boolean
+     */
+    public boolean isValid()
+    {
+        try {
+            validate();
+        }
+        catch (org.exolab.castor.xml.ValidationException vex) {
+            return false;
+        }
+        return true;
+    } //-- boolean isValid() 
+
+    /**
+     * Method marshal
+     * 
+     * 
+     * 
+     * @param out
+     */
+    public void marshal(java.io.Writer out)
+        throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
+    {
+        
+        Marshaller.marshal(this, out);
+    } //-- void marshal(java.io.Writer) 
+
+    /**
+     * Method marshal
+     * 
+     * 
+     * 
+     * @param handler
+     */
+    public void marshal(org.xml.sax.ContentHandler handler)
+        throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
+    {
+        
+        Marshaller.marshal(this, handler);
+    } //-- void marshal(org.xml.sax.ContentHandler) 
+
+    /**
+     * Sets the value of field 'colour'.
+     * 
+     * @param colour the value of field 'colour'.
+     */
+    public void setColour(int colour)
+    {
+        this._colour = colour;
+        this._has_colour = true;
+    } //-- void setColour(int) 
+
+    /**
+     * Sets the value of field 'description'.
+     * 
+     * @param description the value of field 'description'.
+     */
+    public void setDescription(java.lang.String description)
+    {
+        this._description = description;
+    } //-- void setDescription(java.lang.String) 
+
+    /**
+     * Sets the value of field 'displayCharacter'.
+     * 
+     * @param displayCharacter the value of field 'displayCharacter'
+     */
+    public void setDisplayCharacter(java.lang.String displayCharacter)
+    {
+        this._displayCharacter = displayCharacter;
+    } //-- void setDisplayCharacter(java.lang.String) 
+
+    /**
+     * Sets the value of field 'position'.
+     * 
+     * @param position the value of field 'position'.
+     */
+    public void setPosition(int position)
+    {
+        this._position = position;
+        this._has_position = true;
+    } //-- void setPosition(int) 
+
+    /**
+     * Sets the value of field 'secondaryStructure'.
+     * 
+     * @param secondaryStructure the value of field
+     * 'secondaryStructure'.
+     */
+    public void setSecondaryStructure(java.lang.String secondaryStructure)
+    {
+        this._secondaryStructure = secondaryStructure;
+    } //-- void setSecondaryStructure(java.lang.String) 
+
+    /**
+     * Sets the value of field 'value'.
+     * 
+     * @param value the value of field 'value'.
+     */
+    public void setValue(float value)
+    {
+        this._value = value;
+        this._has_value = true;
+    } //-- void setValue(float) 
+
+    /**
+     * Method unmarshal
+     * 
+     * 
+     * 
+     * @param reader
+     * @return Object
+     */
+    public static java.lang.Object unmarshal(java.io.Reader reader)
+        throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
     {
-      validate();
-    }
-    catch (org.exolab.castor.xml.ValidationException vex)
+        return (jalview.schemabinding.version2.AnnotationElement) Unmarshaller.unmarshal(jalview.schemabinding.version2.AnnotationElement.class, reader);
+    } //-- java.lang.Object unmarshal(java.io.Reader) 
+
+    /**
+     * Method validate
+     * 
+     */
+    public void validate()
+        throws org.exolab.castor.xml.ValidationException
     {
-      return false;
-    }
-    return true;
-  } //-- boolean isValid()
-
-  /**
-   * Method marshal
-   *
-   *
-   *
-   * @param out
-   */
-  public void marshal(java.io.Writer out)
-      throws org.exolab.castor.xml.MarshalException,
-      org.exolab.castor.xml.ValidationException
-  {
-
-    Marshaller.marshal(this, out);
-  } //-- void marshal(java.io.Writer)
-
-  /**
-   * Method marshal
-   *
-   *
-   *
-   * @param handler
-   */
-  public void marshal(org.xml.sax.ContentHandler handler)
-      throws java.io.IOException, org.exolab.castor.xml.MarshalException,
-      org.exolab.castor.xml.ValidationException
-  {
-
-    Marshaller.marshal(this, handler);
-  } //-- void marshal(org.xml.sax.ContentHandler)
-
-  /**
-   * Sets the value of field 'colour'.
-   *
-   * @param colour the value of field 'colour'.
-   */
-  public void setColour(int colour)
-  {
-    this._colour = colour;
-    this._has_colour = true;
-  } //-- void setColour(int)
-
-  /**
-   * Sets the value of field 'description'.
-   *
-   * @param description the value of field 'description'.
-   */
-  public void setDescription(java.lang.String description)
-  {
-    this._description = description;
-  } //-- void setDescription(java.lang.String)
-
-  /**
-   * Sets the value of field 'displayCharacter'.
-   *
-   * @param displayCharacter the value of field 'displayCharacter'
-   */
-  public void setDisplayCharacter(java.lang.String displayCharacter)
-  {
-    this._displayCharacter = displayCharacter;
-  } //-- void setDisplayCharacter(java.lang.String)
-
-  /**
-   * Sets the value of field 'position'.
-   *
-   * @param position the value of field 'position'.
-   */
-  public void setPosition(int position)
-  {
-    this._position = position;
-    this._has_position = true;
-  } //-- void setPosition(int)
-
-  /**
-   * Sets the value of field 'secondaryStructure'.
-   *
-   * @param secondaryStructure the value of field
-   * 'secondaryStructure'.
-   */
-  public void setSecondaryStructure(java.lang.String secondaryStructure)
-  {
-    this._secondaryStructure = secondaryStructure;
-  } //-- void setSecondaryStructure(java.lang.String)
-
-  /**
-   * Sets the value of field 'value'.
-   *
-   * @param value the value of field 'value'.
-   */
-  public void setValue(float value)
-  {
-    this._value = value;
-    this._has_value = true;
-  } //-- void setValue(float)
-
-  /**
-   * Method unmarshal
-   *
-   *
-   *
-   * @param reader
-   * @return Object
-   */
-  public static java.lang.Object unmarshal(java.io.Reader reader)
-      throws org.exolab.castor.xml.MarshalException,
-      org.exolab.castor.xml.ValidationException
-  {
-    return (jalview.schemabinding.version2.AnnotationElement) Unmarshaller.
-        unmarshal(jalview.schemabinding.version2.AnnotationElement.class,
-                  reader);
-  } //-- java.lang.Object unmarshal(java.io.Reader)
-
-  /**
-   * Method validate
-   *
-   */
-  public void validate()
-      throws org.exolab.castor.xml.ValidationException
-  {
-    org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.
-        Validator();
-    validator.validate(this);
-  } //-- void validate()
+        org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
+        validator.validate(this);
+    } //-- void validate() 
 
 }