X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2FDBRef.java;h=27e1018e84bd17ab1b620444681ebfcf4c543d7a;hb=b2f9a8d7bce642ff4011bc6d49e02bb0569fbb11;hp=bedb40734240d6a03bdc931073c1eacd91841482;hpb=797df64fa2a0a30773d0f48f5494d4155e5a8be3;p=jalview.git diff --git a/src/jalview/schemabinding/version2/DBRef.java b/src/jalview/schemabinding/version2/DBRef.java index bedb407..27e1018 100644 --- a/src/jalview/schemabinding/version2/DBRef.java +++ b/src/jalview/schemabinding/version2/DBRef.java @@ -1,20 +1,22 @@ /******************************************************************************* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) - * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle - * + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.1) + * Copyright (C) 2014 The Jalview Authors + * * This file is part of Jalview. - * + * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - * + * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . - *******************************************************************************/ + * + * You should have received a copy of the GNU General Public License along with Jalview. + * If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + ******************************************************************************/ /* * This class was automatically generated with * Castor 1.1, using an XML @@ -24,8 +26,8 @@ package jalview.schemabinding.version2; - //---------------------------------/ - //- Imported classes and packages -/ +//---------------------------------/ +//- Imported classes and packages -/ //---------------------------------/ import org.exolab.castor.xml.Marshaller; @@ -36,201 +38,215 @@ import org.exolab.castor.xml.Unmarshaller; * * @version $Revision$ $Date$ */ -public class DBRef implements java.io.Serializable { - - - //--------------------------/ - //- Class/Member Variables -/ - //--------------------------/ - - /** - * Field _source. - */ - private java.lang.String _source; - - /** - * Field _version. - */ - private java.lang.String _version; - - /** - * Field _accessionId. - */ - private java.lang.String _accessionId; - - /** - * Field _mapping. - */ - private jalview.schemabinding.version2.Mapping _mapping; - - - //----------------/ - //- Constructors -/ - //----------------/ - - public DBRef() { - super(); - } - - - //-----------/ - //- Methods -/ - //-----------/ - - /** - * Returns the value of field 'accessionId'. - * - * @return the value of field 'AccessionId'. - */ - public java.lang.String getAccessionId( - ) { - return this._accessionId; - } - - /** - * Returns the value of field 'mapping'. - * - * @return the value of field 'Mapping'. - */ - public jalview.schemabinding.version2.Mapping getMapping( - ) { - return this._mapping; - } - - /** - * Returns the value of field 'source'. - * - * @return the value of field 'Source'. - */ - public java.lang.String getSource( - ) { - return this._source; - } - - /** - * Returns the value of field 'version'. - * - * @return the value of field 'Version'. - */ - public java.lang.String getVersion( - ) { - return this._version; - } - - /** - * Method isValid. - * - * @return true if this object is valid according to the schema - */ - public boolean isValid( - ) { - try { - validate(); - } catch (org.exolab.castor.xml.ValidationException vex) { - return false; - } - return true; - } - - /** - * - * - * @param out - * @throws org.exolab.castor.xml.MarshalException if object is - * null or if any SAXException is thrown during marshaling - * @throws org.exolab.castor.xml.ValidationException if this - * object is an invalid instance according to the schema - */ - public void marshal( - final java.io.Writer out) - throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { - Marshaller.marshal(this, out); - } - - /** - * - * - * @param handler - * @throws java.io.IOException if an IOException occurs during - * marshaling - * @throws org.exolab.castor.xml.ValidationException if this - * object is an invalid instance according to the schema - * @throws org.exolab.castor.xml.MarshalException if object is - * null or if any SAXException is thrown during marshaling - */ - public void marshal( - final org.xml.sax.ContentHandler handler) - throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { - Marshaller.marshal(this, handler); - } - - /** - * Sets the value of field 'accessionId'. - * - * @param accessionId the value of field 'accessionId'. - */ - public void setAccessionId( - final java.lang.String accessionId) { - this._accessionId = accessionId; - } - - /** - * Sets the value of field 'mapping'. - * - * @param mapping the value of field 'mapping'. - */ - public void setMapping( - final jalview.schemabinding.version2.Mapping mapping) { - this._mapping = mapping; - } - - /** - * Sets the value of field 'source'. - * - * @param source the value of field 'source'. - */ - public void setSource( - final java.lang.String source) { - this._source = source; - } - - /** - * Sets the value of field 'version'. - * - * @param version the value of field 'version'. - */ - public void setVersion( - final java.lang.String version) { - this._version = version; - } - - /** - * Method unmarshal. - * - * @param reader - * @throws org.exolab.castor.xml.MarshalException if object is - * null or if any SAXException is thrown during marshaling - * @throws org.exolab.castor.xml.ValidationException if this - * object is an invalid instance according to the schema - * @return the unmarshaled jalview.schemabinding.version2.DBRef - */ - public static jalview.schemabinding.version2.DBRef unmarshal( - final java.io.Reader reader) - throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { - return (jalview.schemabinding.version2.DBRef) Unmarshaller.unmarshal(jalview.schemabinding.version2.DBRef.class, reader); - } - - /** - * - * - * @throws org.exolab.castor.xml.ValidationException if this - * object is an invalid instance according to the schema - */ - public void validate( - ) - throws org.exolab.castor.xml.ValidationException { - org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); - validator.validate(this); +public class DBRef implements java.io.Serializable +{ + + // --------------------------/ + // - Class/Member Variables -/ + // --------------------------/ + + /** + * Field _source. + */ + private java.lang.String _source; + + /** + * Field _version. + */ + private java.lang.String _version; + + /** + * Field _accessionId. + */ + private java.lang.String _accessionId; + + /** + * Field _mapping. + */ + private jalview.schemabinding.version2.Mapping _mapping; + + // ----------------/ + // - Constructors -/ + // ----------------/ + + public DBRef() + { + super(); + } + + // -----------/ + // - Methods -/ + // -----------/ + + /** + * Returns the value of field 'accessionId'. + * + * @return the value of field 'AccessionId'. + */ + public java.lang.String getAccessionId() + { + return this._accessionId; + } + + /** + * Returns the value of field 'mapping'. + * + * @return the value of field 'Mapping'. + */ + public jalview.schemabinding.version2.Mapping getMapping() + { + return this._mapping; + } + + /** + * Returns the value of field 'source'. + * + * @return the value of field 'Source'. + */ + public java.lang.String getSource() + { + return this._source; + } + + /** + * Returns the value of field 'version'. + * + * @return the value of field 'Version'. + */ + public java.lang.String getVersion() + { + return this._version; + } + + /** + * Method isValid. + * + * @return true if this object is valid according to the schema + */ + public boolean isValid() + { + try + { + validate(); + } catch (org.exolab.castor.xml.ValidationException vex) + { + return false; } + return true; + } + + /** + * + * + * @param out + * @throws org.exolab.castor.xml.MarshalException + * if object is null or if any SAXException is thrown during + * marshaling + * @throws org.exolab.castor.xml.ValidationException + * if this object is an invalid instance according to the schema + */ + public void marshal(final java.io.Writer out) + throws org.exolab.castor.xml.MarshalException, + org.exolab.castor.xml.ValidationException + { + Marshaller.marshal(this, out); + } + + /** + * + * + * @param handler + * @throws java.io.IOException + * if an IOException occurs during marshaling + * @throws org.exolab.castor.xml.ValidationException + * if this object is an invalid instance according to the schema + * @throws org.exolab.castor.xml.MarshalException + * if object is null or if any SAXException is thrown during + * marshaling + */ + public void marshal(final org.xml.sax.ContentHandler handler) + throws java.io.IOException, + org.exolab.castor.xml.MarshalException, + org.exolab.castor.xml.ValidationException + { + Marshaller.marshal(this, handler); + } + + /** + * Sets the value of field 'accessionId'. + * + * @param accessionId + * the value of field 'accessionId'. + */ + public void setAccessionId(final java.lang.String accessionId) + { + this._accessionId = accessionId; + } + + /** + * Sets the value of field 'mapping'. + * + * @param mapping + * the value of field 'mapping'. + */ + public void setMapping( + final jalview.schemabinding.version2.Mapping mapping) + { + this._mapping = mapping; + } + + /** + * Sets the value of field 'source'. + * + * @param source + * the value of field 'source'. + */ + public void setSource(final java.lang.String source) + { + this._source = source; + } + + /** + * Sets the value of field 'version'. + * + * @param version + * the value of field 'version'. + */ + public void setVersion(final java.lang.String version) + { + this._version = version; + } + + /** + * Method unmarshal. + * + * @param reader + * @throws org.exolab.castor.xml.MarshalException + * if object is null or if any SAXException is thrown during + * marshaling + * @throws org.exolab.castor.xml.ValidationException + * if this object is an invalid instance according to the schema + * @return the unmarshaled jalview.schemabinding.version2.DBRef + */ + public static jalview.schemabinding.version2.DBRef unmarshal( + final java.io.Reader reader) + throws org.exolab.castor.xml.MarshalException, + org.exolab.castor.xml.ValidationException + { + return (jalview.schemabinding.version2.DBRef) Unmarshaller.unmarshal( + jalview.schemabinding.version2.DBRef.class, reader); + } + + /** + * + * + * @throws org.exolab.castor.xml.ValidationException + * if this object is an invalid instance according to the schema + */ + public void validate() throws org.exolab.castor.xml.ValidationException + { + org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); + validator.validate(this); + } }