X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2FDBRef.java;h=85997ffca2b956012ded0a237cf2342aaa8ca3b6;hb=34471317418a4900aca1bb27a7dd3961dc22ab98;hp=576a4ad5ff391531f0459ce5bb6fc82b1d19505a;hpb=48df59aa393e03aa7269b2df662ac1b8d58cbb25;p=jalview.git
diff --git a/src/jalview/schemabinding/version2/DBRef.java b/src/jalview/schemabinding/version2/DBRef.java
index 576a4ad..85997ff 100644
--- a/src/jalview/schemabinding/version2/DBRef.java
+++ b/src/jalview/schemabinding/version2/DBRef.java
@@ -1,199 +1,233 @@
-/*
- * This class was automatically generated with
- * Castor 0.9.6, using an XML
- * Schema.
- * $Id$
- */
-
-package jalview.schemabinding.version2;
-
- //---------------------------------/
- //- Imported classes and packages -/
-//---------------------------------/
-
-import java.io.IOException;
-import java.io.Reader;
-import java.io.Serializable;
-import java.io.Writer;
-import org.exolab.castor.xml.MarshalException;
-import org.exolab.castor.xml.Marshaller;
-import org.exolab.castor.xml.Unmarshaller;
-import org.exolab.castor.xml.ValidationException;
-import org.xml.sax.ContentHandler;
-
-/**
- * Class DBRef.
- *
- * @version $Revision$ $Date$
- */
-public class DBRef implements java.io.Serializable {
-
-
- //--------------------------/
- //- Class/Member Variables -/
- //--------------------------/
-
- /**
- * Field _source
- */
- private java.lang.String _source;
-
- /**
- * Field _version
- */
- private java.lang.String _version;
-
- /**
- * Field _accessionId
- */
- private java.lang.String _accessionId;
-
-
- //----------------/
- //- Constructors -/
- //----------------/
-
- public DBRef() {
- super();
- } //-- jalview.schemabinding.version2.DBRef()
-
-
- //-----------/
- //- Methods -/
- //-----------/
-
- /**
- * Returns the value of field 'accessionId'.
- *
- * @return String
- * @return the value of field 'accessionId'.
- */
- public java.lang.String getAccessionId()
- {
- return this._accessionId;
- } //-- java.lang.String getAccessionId()
-
- /**
- * Returns the value of field 'source'.
- *
- * @return String
- * @return the value of field 'source'.
- */
- public java.lang.String getSource()
- {
- return this._source;
- } //-- java.lang.String getSource()
-
- /**
- * Returns the value of field 'version'.
- *
- * @return String
- * @return the value of field 'version'.
- */
- public java.lang.String getVersion()
- {
- return this._version;
- } //-- java.lang.String getVersion()
-
- /**
- * Method isValid
- *
- *
- *
- * @return boolean
- */
- public boolean isValid()
- {
- try {
- validate();
- }
- catch (org.exolab.castor.xml.ValidationException vex) {
- return false;
- }
- return true;
- } //-- boolean isValid()
-
- /**
- * Method marshal
- *
- *
- *
- * @param out
- */
- public void marshal(java.io.Writer out)
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
- {
-
- Marshaller.marshal(this, out);
- } //-- void marshal(java.io.Writer)
-
- /**
- * Method marshal
- *
- *
- *
- * @param handler
- */
- public void marshal(org.xml.sax.ContentHandler handler)
- throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
- {
-
- Marshaller.marshal(this, handler);
- } //-- void marshal(org.xml.sax.ContentHandler)
-
- /**
- * Sets the value of field 'accessionId'.
- *
- * @param accessionId the value of field 'accessionId'.
- */
- public void setAccessionId(java.lang.String accessionId)
- {
- this._accessionId = accessionId;
- } //-- void setAccessionId(java.lang.String)
-
- /**
- * Sets the value of field 'source'.
- *
- * @param source the value of field 'source'.
- */
- public void setSource(java.lang.String source)
- {
- this._source = source;
- } //-- void setSource(java.lang.String)
-
- /**
- * Sets the value of field 'version'.
- *
- * @param version the value of field 'version'.
- */
- public void setVersion(java.lang.String version)
- {
- this._version = version;
- } //-- void setVersion(java.lang.String)
-
- /**
- * Method unmarshal
- *
- *
- *
- * @param reader
- * @return Object
- */
- public static java.lang.Object unmarshal(java.io.Reader reader)
- throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException
- {
- return (jalview.schemabinding.version2.DBRef) Unmarshaller.unmarshal(jalview.schemabinding.version2.DBRef.class, reader);
- } //-- java.lang.Object unmarshal(java.io.Reader)
-
- /**
- * Method validate
- *
- */
- public void validate()
- throws org.exolab.castor.xml.ValidationException
- {
- org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
- validator.validate(this);
- } //-- void validate()
-
-}
+/*
+ * This class was automatically generated with
+ * Castor 1.1, using an XML
+ * Schema.
+ * $Id$
+ */
+
+package jalview.schemabinding.version2;
+
+//---------------------------------/
+//- Imported classes and packages -/
+//---------------------------------/
+
+import org.exolab.castor.xml.Marshaller;
+import org.exolab.castor.xml.Unmarshaller;
+
+/**
+ * Class DBRef.
+ *
+ * @version $Revision$ $Date$
+ */
+public class DBRef implements java.io.Serializable
+{
+
+ // --------------------------/
+ // - Class/Member Variables -/
+ // --------------------------/
+
+ /**
+ * Field _source.
+ */
+ private java.lang.String _source;
+
+ /**
+ * Field _version.
+ */
+ private java.lang.String _version;
+
+ /**
+ * Field _accessionId.
+ */
+ private java.lang.String _accessionId;
+
+ /**
+ * Field _mapping.
+ */
+ private jalview.schemabinding.version2.Mapping _mapping;
+
+ // ----------------/
+ // - Constructors -/
+ // ----------------/
+
+ public DBRef()
+ {
+ super();
+ }
+
+ // -----------/
+ // - Methods -/
+ // -----------/
+
+ /**
+ * Returns the value of field 'accessionId'.
+ *
+ * @return the value of field 'AccessionId'.
+ */
+ public java.lang.String getAccessionId()
+ {
+ return this._accessionId;
+ }
+
+ /**
+ * Returns the value of field 'mapping'.
+ *
+ * @return the value of field 'Mapping'.
+ */
+ public jalview.schemabinding.version2.Mapping getMapping()
+ {
+ return this._mapping;
+ }
+
+ /**
+ * Returns the value of field 'source'.
+ *
+ * @return the value of field 'Source'.
+ */
+ public java.lang.String getSource()
+ {
+ return this._source;
+ }
+
+ /**
+ * Returns the value of field 'version'.
+ *
+ * @return the value of field 'Version'.
+ */
+ public java.lang.String getVersion()
+ {
+ return this._version;
+ }
+
+ /**
+ * Method isValid.
+ *
+ * @return true if this object is valid according to the schema
+ */
+ public boolean isValid()
+ {
+ try
+ {
+ validate();
+ } catch (org.exolab.castor.xml.ValidationException vex)
+ {
+ return false;
+ }
+ return true;
+ }
+
+ /**
+ *
+ *
+ * @param out
+ * @throws org.exolab.castor.xml.MarshalException
+ * if object is null or if any SAXException is thrown during
+ * marshaling
+ * @throws org.exolab.castor.xml.ValidationException
+ * if this object is an invalid instance according to the schema
+ */
+ public void marshal(final java.io.Writer out)
+ throws org.exolab.castor.xml.MarshalException,
+ org.exolab.castor.xml.ValidationException
+ {
+ Marshaller.marshal(this, out);
+ }
+
+ /**
+ *
+ *
+ * @param handler
+ * @throws java.io.IOException
+ * if an IOException occurs during marshaling
+ * @throws org.exolab.castor.xml.ValidationException
+ * if this object is an invalid instance according to the schema
+ * @throws org.exolab.castor.xml.MarshalException
+ * if object is null or if any SAXException is thrown during
+ * marshaling
+ */
+ public void marshal(final org.xml.sax.ContentHandler handler)
+ throws java.io.IOException,
+ org.exolab.castor.xml.MarshalException,
+ org.exolab.castor.xml.ValidationException
+ {
+ Marshaller.marshal(this, handler);
+ }
+
+ /**
+ * Sets the value of field 'accessionId'.
+ *
+ * @param accessionId
+ * the value of field 'accessionId'.
+ */
+ public void setAccessionId(final java.lang.String accessionId)
+ {
+ this._accessionId = accessionId;
+ }
+
+ /**
+ * Sets the value of field 'mapping'.
+ *
+ * @param mapping
+ * the value of field 'mapping'.
+ */
+ public void setMapping(
+ final jalview.schemabinding.version2.Mapping mapping)
+ {
+ this._mapping = mapping;
+ }
+
+ /**
+ * Sets the value of field 'source'.
+ *
+ * @param source
+ * the value of field 'source'.
+ */
+ public void setSource(final java.lang.String source)
+ {
+ this._source = source;
+ }
+
+ /**
+ * Sets the value of field 'version'.
+ *
+ * @param version
+ * the value of field 'version'.
+ */
+ public void setVersion(final java.lang.String version)
+ {
+ this._version = version;
+ }
+
+ /**
+ * Method unmarshal.
+ *
+ * @param reader
+ * @throws org.exolab.castor.xml.MarshalException
+ * if object is null or if any SAXException is thrown during
+ * marshaling
+ * @throws org.exolab.castor.xml.ValidationException
+ * if this object is an invalid instance according to the schema
+ * @return the unmarshaled jalview.schemabinding.version2.DBRef
+ */
+ public static jalview.schemabinding.version2.DBRef unmarshal(
+ final java.io.Reader reader)
+ throws org.exolab.castor.xml.MarshalException,
+ org.exolab.castor.xml.ValidationException
+ {
+ return (jalview.schemabinding.version2.DBRef) Unmarshaller.unmarshal(
+ jalview.schemabinding.version2.DBRef.class, reader);
+ }
+
+ /**
+ *
+ *
+ * @throws org.exolab.castor.xml.ValidationException
+ * if this object is an invalid instance according to the schema
+ */
+ public void validate() throws org.exolab.castor.xml.ValidationException
+ {
+ org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator();
+ validator.validate(this);
+ }
+
+}