X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2FFeatureDescriptor.java;h=d0b9372e188ad5085b6273b5d0c6772ac4d419e7;hb=def10fb2252c67e8256ec1fddc6605e34d760c63;hp=0641afa90fd1fbb8be411c633f23974deaea8748;hpb=7bc226b58110fa26d9dbd3f0c78095d06909ffc3;p=jalview.git

diff --git a/src/jalview/schemabinding/version2/FeatureDescriptor.java b/src/jalview/schemabinding/version2/FeatureDescriptor.java
index 0641afa..d0b9372 100755
--- a/src/jalview/schemabinding/version2/FeatureDescriptor.java
+++ b/src/jalview/schemabinding/version2/FeatureDescriptor.java
@@ -1,5 +1,5 @@
 /*
- * This class was automatically generated with
+ * This class was automatically generated with 
  * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML
  * Schema.
  * $Id$
@@ -7,542 +7,471 @@
 
 package jalview.schemabinding.version2;
 
-//---------------------------------/
-//- Imported classes and packages -/
+  //---------------------------------/
+ //- Imported classes and packages -/
 //---------------------------------/
 
+import org.exolab.castor.mapping.AccessMode;
+import org.exolab.castor.xml.TypeValidator;
+import org.exolab.castor.xml.XMLFieldDescriptor;
 import org.exolab.castor.xml.validators.*;
 
 /**
  * Class FeatureDescriptor.
- *
+ * 
  * @version $Revision$ $Date$
  */
-public class FeatureDescriptor
-    extends org.exolab.castor.xml.util.XMLClassDescriptorImpl
-{
-
-  //--------------------------/
-  //- Class/Member Variables -/
-  //--------------------------/
-
-  /**
-   * Field nsPrefix
-   */
-  private java.lang.String nsPrefix;
-
-  /**
-   * Field nsURI
-   */
-  private java.lang.String nsURI;
-
-  /**
-   * Field xmlName
-   */
-  private java.lang.String xmlName;
-
-  /**
-   * Field identity
-   */
-  private org.exolab.castor.xml.XMLFieldDescriptor identity;
-
-  //----------------/
-  //- Constructors -/
-  //----------------/
-
-  public FeatureDescriptor()
-  {
-    super();
-    nsURI = "www.jalview.org";
-    xmlName = "feature";
-
-    //-- set grouping compositor
-    setCompositorAsSequence();
-    org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
-    org.exolab.castor.xml.XMLFieldHandler handler = null;
-    org.exolab.castor.xml.FieldValidator fieldValidator = null;
-    //-- initialize attribute descriptors
-
-    //-- _begin
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.
-        Integer.TYPE, "_begin", "begin",
-        org.exolab.castor.xml.NodeType.Attribute);
-    handler = (new org.exolab.castor.xml.XMLFieldHandler()
-    {
-      public java.lang.Object getValue(java.lang.Object object)
-          throws IllegalStateException
-      {
-        Feature target = (Feature) object;
-        if (!target.hasBegin())
-        {
-          return null;
+public class FeatureDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl {
+
+
+      //--------------------------/
+     //- Class/Member Variables -/
+    //--------------------------/
+
+    /**
+     * Field nsPrefix
+     */
+    private java.lang.String nsPrefix;
+
+    /**
+     * Field nsURI
+     */
+    private java.lang.String nsURI;
+
+    /**
+     * Field xmlName
+     */
+    private java.lang.String xmlName;
+
+    /**
+     * Field identity
+     */
+    private org.exolab.castor.xml.XMLFieldDescriptor identity;
+
+
+      //----------------/
+     //- Constructors -/
+    //----------------/
+
+    public FeatureDescriptor() {
+        super();
+        nsURI = "www.jalview.org";
+        xmlName = "feature";
+        
+        //-- set grouping compositor
+        setCompositorAsSequence();
+        org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;
+        org.exolab.castor.xml.XMLFieldHandler              handler        = null;
+        org.exolab.castor.xml.FieldValidator               fieldValidator = null;
+        //-- initialize attribute descriptors
+        
+        //-- _begin
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_begin", "begin", org.exolab.castor.xml.NodeType.Attribute);
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Feature target = (Feature) object;
+                if(!target.hasBegin())
+                    return null;
+                return new java.lang.Integer(target.getBegin());
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Feature target = (Feature) object;
+                    // ignore null values for non optional primitives
+                    if (value == null) return;
+                    
+                    target.setBegin( ((java.lang.Integer)value).intValue());
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return null;
+            }
+        } );
+        desc.setHandler(handler);
+        desc.setRequired(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _begin
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(1);
+        { //-- local scope
+            IntegerValidator typeValidator= new IntegerValidator();
+            fieldValidator.setValidator(typeValidator);
         }
-        return new java.lang.Integer(target.getBegin());
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-          throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          Feature target = (Feature) object;
-          // ignore null values for non optional primitives
-          if (value == null)
-          {
-            return;
-          }
-
-          target.setBegin( ( (java.lang.Integer) value).intValue());
+        desc.setValidator(fieldValidator);
+        //-- _end
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_end", "end", org.exolab.castor.xml.NodeType.Attribute);
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Feature target = (Feature) object;
+                if(!target.hasEnd())
+                    return null;
+                return new java.lang.Integer(target.getEnd());
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Feature target = (Feature) object;
+                    // ignore null values for non optional primitives
+                    if (value == null) return;
+                    
+                    target.setEnd( ((java.lang.Integer)value).intValue());
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return null;
+            }
+        } );
+        desc.setHandler(handler);
+        desc.setRequired(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _end
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(1);
+        { //-- local scope
+            IntegerValidator typeValidator= new IntegerValidator();
+            fieldValidator.setValidator(typeValidator);
         }
-        catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
+        desc.setValidator(fieldValidator);
+        //-- _type
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_type", "type", org.exolab.castor.xml.NodeType.Attribute);
+        desc.setImmutable(true);
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Feature target = (Feature) object;
+                return target.getType();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Feature target = (Feature) object;
+                    target.setType( (java.lang.String) value);
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return null;
+            }
+        } );
+        desc.setHandler(handler);
+        desc.setRequired(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _type
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(1);
+        { //-- local scope
+            StringValidator typeValidator = new StringValidator();
+            typeValidator.setWhiteSpace("preserve");
+            fieldValidator.setValidator(typeValidator);
         }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return null;
-      }
-    });
-    desc.setHandler(handler);
-    desc.setRequired(true);
-    addFieldDescriptor(desc);
-
-    //-- validation code for: _begin
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    fieldValidator.setMinOccurs(1);
-    { //-- local scope
-      IntegerValidator typeValidator = new IntegerValidator();
-      fieldValidator.setValidator(typeValidator);
-    }
-    desc.setValidator(fieldValidator);
-    //-- _end
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.
-        Integer.TYPE, "_end", "end", org.exolab.castor.xml.NodeType.Attribute);
-    handler = (new org.exolab.castor.xml.XMLFieldHandler()
-    {
-      public java.lang.Object getValue(java.lang.Object object)
-          throws IllegalStateException
-      {
-        Feature target = (Feature) object;
-        if (!target.hasEnd())
-        {
-          return null;
+        desc.setValidator(fieldValidator);
+        //-- _description
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_description", "description", org.exolab.castor.xml.NodeType.Attribute);
+        desc.setImmutable(true);
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Feature target = (Feature) object;
+                return target.getDescription();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Feature target = (Feature) object;
+                    target.setDescription( (java.lang.String) value);
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return null;
+            }
+        } );
+        desc.setHandler(handler);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _description
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        { //-- local scope
+            StringValidator typeValidator = new StringValidator();
+            typeValidator.setWhiteSpace("preserve");
+            fieldValidator.setValidator(typeValidator);
         }
-        return new java.lang.Integer(target.getEnd());
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-          throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          Feature target = (Feature) object;
-          // ignore null values for non optional primitives
-          if (value == null)
-          {
-            return;
-          }
-
-          target.setEnd( ( (java.lang.Integer) value).intValue());
+        desc.setValidator(fieldValidator);
+        //-- _status
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_status", "status", org.exolab.castor.xml.NodeType.Attribute);
+        desc.setImmutable(true);
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Feature target = (Feature) object;
+                return target.getStatus();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Feature target = (Feature) object;
+                    target.setStatus( (java.lang.String) value);
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return null;
+            }
+        } );
+        desc.setHandler(handler);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _status
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        { //-- local scope
+            StringValidator typeValidator = new StringValidator();
+            typeValidator.setWhiteSpace("preserve");
+            fieldValidator.setValidator(typeValidator);
         }
-        catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
+        desc.setValidator(fieldValidator);
+        //-- _featureGroup
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_featureGroup", "featureGroup", org.exolab.castor.xml.NodeType.Attribute);
+        desc.setImmutable(true);
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Feature target = (Feature) object;
+                return target.getFeatureGroup();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Feature target = (Feature) object;
+                    target.setFeatureGroup( (java.lang.String) value);
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return null;
+            }
+        } );
+        desc.setHandler(handler);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _featureGroup
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        { //-- local scope
+            StringValidator typeValidator = new StringValidator();
+            typeValidator.setWhiteSpace("preserve");
+            fieldValidator.setValidator(typeValidator);
         }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return null;
-      }
-    });
-    desc.setHandler(handler);
-    desc.setRequired(true);
-    addFieldDescriptor(desc);
-
-    //-- validation code for: _end
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    fieldValidator.setMinOccurs(1);
-    { //-- local scope
-      IntegerValidator typeValidator = new IntegerValidator();
-      fieldValidator.setValidator(typeValidator);
-    }
-    desc.setValidator(fieldValidator);
-    //-- _type
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.
-        String.class, "_type", "type", org.exolab.castor.xml.NodeType.Attribute);
-    desc.setImmutable(true);
-    handler = (new org.exolab.castor.xml.XMLFieldHandler()
-    {
-      public java.lang.Object getValue(java.lang.Object object)
-          throws IllegalStateException
-      {
-        Feature target = (Feature) object;
-        return target.getType();
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-          throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          Feature target = (Feature) object;
-          target.setType( (java.lang.String) value);
+        desc.setValidator(fieldValidator);
+        //-- _score
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(float.class, "_score", "score", org.exolab.castor.xml.NodeType.Attribute);
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Feature target = (Feature) object;
+                if(!target.hasScore())
+                    return null;
+                return new java.lang.Float(target.getScore());
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Feature target = (Feature) object;
+                    // if null, use delete method for optional primitives 
+                    if (value == null) {
+                        target.deleteScore();
+                        return;
+                    }
+                    target.setScore( ((java.lang.Float)value).floatValue());
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return null;
+            }
+        } );
+        desc.setHandler(handler);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _score
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        { //-- local scope
+            FloatValidator typeValidator = new FloatValidator();
+            fieldValidator.setValidator(typeValidator);
         }
-        catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
+        desc.setValidator(fieldValidator);
+        //-- initialize element descriptors
+        
+        //-- _otherDataList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.OtherData.class, "_otherDataList", "otherData", org.exolab.castor.xml.NodeType.Element);
+        handler = (new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                Feature target = (Feature) object;
+                return target.getOtherData();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    Feature target = (Feature) object;
+                    target.addOtherData( (jalview.schemabinding.version2.OtherData) value);
+                }
+                catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance( java.lang.Object parent ) {
+                return new jalview.schemabinding.version2.OtherData();
+            }
+        } );
+        desc.setHandler(handler);
+        desc.setNameSpaceURI("www.jalview.org");
+        desc.setMultivalued(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _otherDataList
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(0);
+        { //-- local scope
         }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return null;
-      }
-    });
-    desc.setHandler(handler);
-    desc.setRequired(true);
-    addFieldDescriptor(desc);
-
-    //-- validation code for: _type
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    fieldValidator.setMinOccurs(1);
-    { //-- local scope
-      StringValidator typeValidator = new StringValidator();
-      typeValidator.setWhiteSpace("preserve");
-      fieldValidator.setValidator(typeValidator);
-    }
-    desc.setValidator(fieldValidator);
-    //-- _description
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.
-        String.class, "_description", "description",
-        org.exolab.castor.xml.NodeType.Attribute);
-    desc.setImmutable(true);
-    handler = (new org.exolab.castor.xml.XMLFieldHandler()
+        desc.setValidator(fieldValidator);
+    } //-- jalview.schemabinding.version2.FeatureDescriptor()
+
+
+      //-----------/
+     //- Methods -/
+    //-----------/
+
+    /**
+     * Method getAccessMode
+     * 
+     * 
+     * 
+     * @return AccessMode
+     */
+    public org.exolab.castor.mapping.AccessMode getAccessMode()
     {
-      public java.lang.Object getValue(java.lang.Object object)
-          throws IllegalStateException
-      {
-        Feature target = (Feature) object;
-        return target.getDescription();
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-          throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          Feature target = (Feature) object;
-          target.setDescription( (java.lang.String) value);
-        }
-        catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
-        }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
         return null;
-      }
-    });
-    desc.setHandler(handler);
-    addFieldDescriptor(desc);
-
-    //-- validation code for: _description
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    { //-- local scope
-      StringValidator typeValidator = new StringValidator();
-      typeValidator.setWhiteSpace("preserve");
-      fieldValidator.setValidator(typeValidator);
-    }
-    desc.setValidator(fieldValidator);
-    //-- _status
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.
-        String.class, "_status", "status",
-        org.exolab.castor.xml.NodeType.Attribute);
-    desc.setImmutable(true);
-    handler = (new org.exolab.castor.xml.XMLFieldHandler()
+    } //-- org.exolab.castor.mapping.AccessMode getAccessMode() 
+
+    /**
+     * Method getExtends
+     * 
+     * 
+     * 
+     * @return ClassDescriptor
+     */
+    public org.exolab.castor.mapping.ClassDescriptor getExtends()
     {
-      public java.lang.Object getValue(java.lang.Object object)
-          throws IllegalStateException
-      {
-        Feature target = (Feature) object;
-        return target.getStatus();
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-          throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          Feature target = (Feature) object;
-          target.setStatus( (java.lang.String) value);
-        }
-        catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
-        }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
         return null;
-      }
-    });
-    desc.setHandler(handler);
-    addFieldDescriptor(desc);
-
-    //-- validation code for: _status
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    { //-- local scope
-      StringValidator typeValidator = new StringValidator();
-      typeValidator.setWhiteSpace("preserve");
-      fieldValidator.setValidator(typeValidator);
-    }
-    desc.setValidator(fieldValidator);
-    //-- _featureGroup
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.
-        String.class, "_featureGroup", "featureGroup",
-        org.exolab.castor.xml.NodeType.Attribute);
-    desc.setImmutable(true);
-    handler = (new org.exolab.castor.xml.XMLFieldHandler()
+    } //-- org.exolab.castor.mapping.ClassDescriptor getExtends() 
+
+    /**
+     * Method getIdentity
+     * 
+     * 
+     * 
+     * @return FieldDescriptor
+     */
+    public org.exolab.castor.mapping.FieldDescriptor getIdentity()
     {
-      public java.lang.Object getValue(java.lang.Object object)
-          throws IllegalStateException
-      {
-        Feature target = (Feature) object;
-        return target.getFeatureGroup();
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-          throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          Feature target = (Feature) object;
-          target.setFeatureGroup( (java.lang.String) value);
-        }
-        catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
-        }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return null;
-      }
-    });
-    desc.setHandler(handler);
-    addFieldDescriptor(desc);
-
-    //-- validation code for: _featureGroup
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    { //-- local scope
-      StringValidator typeValidator = new StringValidator();
-      typeValidator.setWhiteSpace("preserve");
-      fieldValidator.setValidator(typeValidator);
-    }
-    desc.setValidator(fieldValidator);
-    //-- _score
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(float.class,
-        "_score", "score", org.exolab.castor.xml.NodeType.Attribute);
-    handler = (new org.exolab.castor.xml.XMLFieldHandler()
+        return identity;
+    } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity() 
+
+    /**
+     * Method getJavaClass
+     * 
+     * 
+     * 
+     * @return Class
+     */
+    public java.lang.Class getJavaClass()
     {
-      public java.lang.Object getValue(java.lang.Object object)
-          throws IllegalStateException
-      {
-        Feature target = (Feature) object;
-        if (!target.hasScore())
-        {
-          return null;
-        }
-        return new java.lang.Float(target.getScore());
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-          throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          Feature target = (Feature) object;
-          // if null, use delete method for optional primitives
-          if (value == null)
-          {
-            target.deleteScore();
-            return;
-          }
-          target.setScore( ( (java.lang.Float) value).floatValue());
-        }
-        catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
-        }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return null;
-      }
-    });
-    desc.setHandler(handler);
-    addFieldDescriptor(desc);
-
-    //-- validation code for: _score
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    { //-- local scope
-      FloatValidator typeValidator = new FloatValidator();
-      fieldValidator.setValidator(typeValidator);
-    }
-    desc.setValidator(fieldValidator);
-    //-- initialize element descriptors
-
-    //-- _otherDataList
-    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.
-        schemabinding.version2.OtherData.class, "_otherDataList", "otherData",
-        org.exolab.castor.xml.NodeType.Element);
-    handler = (new org.exolab.castor.xml.XMLFieldHandler()
+        return jalview.schemabinding.version2.Feature.class;
+    } //-- java.lang.Class getJavaClass() 
+
+    /**
+     * Method getNameSpacePrefix
+     * 
+     * 
+     * 
+     * @return String
+     */
+    public java.lang.String getNameSpacePrefix()
     {
-      public java.lang.Object getValue(java.lang.Object object)
-          throws IllegalStateException
-      {
-        Feature target = (Feature) object;
-        return target.getOtherData();
-      }
-
-      public void setValue(java.lang.Object object, java.lang.Object value)
-          throws IllegalStateException, IllegalArgumentException
-      {
-        try
-        {
-          Feature target = (Feature) object;
-          target.addOtherData( (jalview.schemabinding.version2.OtherData) value);
-        }
-        catch (java.lang.Exception ex)
-        {
-          throw new IllegalStateException(ex.toString());
-        }
-      }
-
-      public java.lang.Object newInstance(java.lang.Object parent)
-      {
-        return new jalview.schemabinding.version2.OtherData();
-      }
-    });
-    desc.setHandler(handler);
-    desc.setNameSpaceURI("www.jalview.org");
-    desc.setMultivalued(true);
-    addFieldDescriptor(desc);
-
-    //-- validation code for: _otherDataList
-    fieldValidator = new org.exolab.castor.xml.FieldValidator();
-    fieldValidator.setMinOccurs(0);
-    { //-- local scope
-    }
-    desc.setValidator(fieldValidator);
-  } //-- jalview.schemabinding.version2.FeatureDescriptor()
-
-  //-----------/
-  //- Methods -/
-  //-----------/
-
-  /**
-   * Method getAccessMode
-   *
-   *
-   *
-   * @return AccessMode
-   */
-  public org.exolab.castor.mapping.AccessMode getAccessMode()
-  {
-    return null;
-  } //-- org.exolab.castor.mapping.AccessMode getAccessMode()
-
-  /**
-   * Method getExtends
-   *
-   *
-   *
-   * @return ClassDescriptor
-   */
-  public org.exolab.castor.mapping.ClassDescriptor getExtends()
-  {
-    return null;
-  } //-- org.exolab.castor.mapping.ClassDescriptor getExtends()
-
-  /**
-   * Method getIdentity
-   *
-   *
-   *
-   * @return FieldDescriptor
-   */
-  public org.exolab.castor.mapping.FieldDescriptor getIdentity()
-  {
-    return identity;
-  } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity()
-
-  /**
-   * Method getJavaClass
-   *
-   *
-   *
-   * @return Class
-   */
-  public java.lang.Class getJavaClass()
-  {
-    return jalview.schemabinding.version2.Feature.class;
-  } //-- java.lang.Class getJavaClass()
-
-  /**
-   * Method getNameSpacePrefix
-   *
-   *
-   *
-   * @return String
-   */
-  public java.lang.String getNameSpacePrefix()
-  {
-    return nsPrefix;
-  } //-- java.lang.String getNameSpacePrefix()
-
-  /**
-   * Method getNameSpaceURI
-   *
-   *
-   *
-   * @return String
-   */
-  public java.lang.String getNameSpaceURI()
-  {
-    return nsURI;
-  } //-- java.lang.String getNameSpaceURI()
-
-  /**
-   * Method getValidator
-   *
-   *
-   *
-   * @return TypeValidator
-   */
-  public org.exolab.castor.xml.TypeValidator getValidator()
-  {
-    return this;
-  } //-- org.exolab.castor.xml.TypeValidator getValidator()
-
-  /**
-   * Method getXMLName
-   *
-   *
-   *
-   * @return String
-   */
-  public java.lang.String getXMLName()
-  {
-    return xmlName;
-  } //-- java.lang.String getXMLName()
+        return nsPrefix;
+    } //-- java.lang.String getNameSpacePrefix() 
+
+    /**
+     * Method getNameSpaceURI
+     * 
+     * 
+     * 
+     * @return String
+     */
+    public java.lang.String getNameSpaceURI()
+    {
+        return nsURI;
+    } //-- java.lang.String getNameSpaceURI() 
+
+    /**
+     * Method getValidator
+     * 
+     * 
+     * 
+     * @return TypeValidator
+     */
+    public org.exolab.castor.xml.TypeValidator getValidator()
+    {
+        return this;
+    } //-- org.exolab.castor.xml.TypeValidator getValidator() 
+
+    /**
+     * Method getXMLName
+     * 
+     * 
+     * 
+     * @return String
+     */
+    public java.lang.String getXMLName()
+    {
+        return xmlName;
+    } //-- java.lang.String getXMLName() 
 
 }