X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2FJGroup.java;h=e75a3329c176d6e727074bd98dc055b632e58ec3;hb=0233fbee0ff0d7fad302aa2da743c51fd64be101;hp=c25de2be39765458645d6649b4b63751e141eca2;hpb=c636e45f030b140229ec8d0748245da4a53411b5;p=jalview.git

diff --git a/src/jalview/schemabinding/version2/JGroup.java b/src/jalview/schemabinding/version2/JGroup.java
index c25de2b..e75a332 100755
--- a/src/jalview/schemabinding/version2/JGroup.java
+++ b/src/jalview/schemabinding/version2/JGroup.java
@@ -188,14 +188,14 @@ public class JGroup implements java.io.Serializable {
     private boolean _has_showConsensusHistogram;
 
     /**
-     * Field _showConsensusProfile.
+     * Field _showSequenceLogo.
      */
-    private boolean _showConsensusProfile = false;
+    private boolean _showSequenceLogo = false;
 
     /**
-     * keeps track of state for field: _showConsensusProfile
+     * keeps track of state for field: _showSequenceLogo
      */
-    private boolean _has_showConsensusProfile;
+    private boolean _has_showSequenceLogo;
 
     /**
      * Optional sequence group ID (only needs to be unique for this
@@ -317,9 +317,9 @@ public class JGroup implements java.io.Serializable {
 
     /**
      */
-    public void deleteShowConsensusProfile(
+    public void deleteShowSequenceLogo(
     ) {
-        this._has_showConsensusProfile= false;
+        this._has_showSequenceLogo= false;
     }
 
     /**
@@ -535,13 +535,13 @@ public class JGroup implements java.io.Serializable {
     }
 
     /**
-     * Returns the value of field 'showConsensusProfile'.
+     * Returns the value of field 'showSequenceLogo'.
      * 
-     * @return the value of field 'ShowConsensusProfile'.
+     * @return the value of field 'ShowSequenceLogo'.
      */
-    public boolean getShowConsensusProfile(
+    public boolean getShowSequenceLogo(
     ) {
-        return this._showConsensusProfile;
+        return this._showSequenceLogo;
     }
 
     /**
@@ -687,14 +687,13 @@ public class JGroup implements java.io.Serializable {
     }
 
     /**
-     * Method hasShowConsensusProfile.
+     * Method hasShowSequenceLogo.
      * 
-     * @return true if at least one ShowConsensusProfile has been
-     * added
+     * @return true if at least one ShowSequenceLogo has been added
      */
-    public boolean hasShowConsensusProfile(
+    public boolean hasShowSequenceLogo(
     ) {
-        return this._has_showConsensusProfile;
+        return this._has_showSequenceLogo;
     }
 
     /**
@@ -798,13 +797,13 @@ public class JGroup implements java.io.Serializable {
     }
 
     /**
-     * Returns the value of field 'showConsensusProfile'.
+     * Returns the value of field 'showSequenceLogo'.
      * 
-     * @return the value of field 'ShowConsensusProfile'.
+     * @return the value of field 'ShowSequenceLogo'.
      */
-    public boolean isShowConsensusProfile(
+    public boolean isShowSequenceLogo(
     ) {
-        return this._showConsensusProfile;
+        return this._showSequenceLogo;
     }
 
     /**
@@ -1065,15 +1064,14 @@ public class JGroup implements java.io.Serializable {
     }
 
     /**
-     * Sets the value of field 'showConsensusProfile'.
+     * Sets the value of field 'showSequenceLogo'.
      * 
-     * @param showConsensusProfile the value of field
-     * 'showConsensusProfile'.
+     * @param showSequenceLogo the value of field 'showSequenceLogo'
      */
-    public void setShowConsensusProfile(
-            final boolean showConsensusProfile) {
-        this._showConsensusProfile = showConsensusProfile;
-        this._has_showConsensusProfile = true;
+    public void setShowSequenceLogo(
+            final boolean showSequenceLogo) {
+        this._showSequenceLogo = showSequenceLogo;
+        this._has_showSequenceLogo = true;
     }
 
     /**