X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2FJGroupDescriptor.java;h=15aeb799310f7bbda5e7cc7c6de400adaca10187;hb=7bc226b58110fa26d9dbd3f0c78095d06909ffc3;hp=1985c61a5b53aec5392f13e648a2ebf7c17d3f81;hpb=dd74fc4938723fe5ec48d4e5fdcfbe58ac42a48d;p=jalview.git diff --git a/src/jalview/schemabinding/version2/JGroupDescriptor.java b/src/jalview/schemabinding/version2/JGroupDescriptor.java index 1985c61..15aeb79 100755 --- a/src/jalview/schemabinding/version2/JGroupDescriptor.java +++ b/src/jalview/schemabinding/version2/JGroupDescriptor.java @@ -1,5 +1,5 @@ /* - * This class was automatically generated with + * This class was automatically generated with * Castor 0.9.6, using an XML * Schema. * $Id$ @@ -7,731 +7,876 @@ package jalview.schemabinding.version2; - //---------------------------------/ - //- Imported classes and packages -/ +//---------------------------------/ +//- Imported classes and packages -/ //---------------------------------/ -import org.exolab.castor.mapping.AccessMode; -import org.exolab.castor.xml.TypeValidator; -import org.exolab.castor.xml.XMLFieldDescriptor; import org.exolab.castor.xml.validators.*; /** * Class JGroupDescriptor. - * + * * @version $Revision$ $Date$ */ -public class JGroupDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl { - - - //--------------------------/ - //- Class/Member Variables -/ - //--------------------------/ - - /** - * Field nsPrefix - */ - private java.lang.String nsPrefix; - - /** - * Field nsURI - */ - private java.lang.String nsURI; - - /** - * Field xmlName - */ - private java.lang.String xmlName; - - /** - * Field identity - */ - private org.exolab.castor.xml.XMLFieldDescriptor identity; - - - //----------------/ - //- Constructors -/ - //----------------/ - - public JGroupDescriptor() { - super(); - nsURI = "www.jalview.org"; - xmlName = "JGroup"; - - //-- set grouping compositor - setCompositorAsSequence(); - org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null; - org.exolab.castor.xml.XMLFieldHandler handler = null; - org.exolab.castor.xml.FieldValidator fieldValidator = null; - //-- initialize attribute descriptors - - //-- _start - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_start", "start", org.exolab.castor.xml.NodeType.Attribute); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - if(!target.hasStart()) - return null; - return new java.lang.Integer(target.getStart()); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // if null, use delete method for optional primitives - if (value == null) { - target.deleteStart(); - return; - } - target.setStart( ((java.lang.Integer)value).intValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _start - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - IntegerValidator typeValidator= new IntegerValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _end - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_end", "end", org.exolab.castor.xml.NodeType.Attribute); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - if(!target.hasEnd()) - return null; - return new java.lang.Integer(target.getEnd()); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // if null, use delete method for optional primitives - if (value == null) { - target.deleteEnd(); - return; - } - target.setEnd( ((java.lang.Integer)value).intValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _end - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - IntegerValidator typeValidator= new IntegerValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _name - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_name", "name", org.exolab.castor.xml.NodeType.Attribute); - desc.setImmutable(true); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - return target.getName(); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - target.setName( (java.lang.String) value); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _name - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - StringValidator typeValidator = new StringValidator(); - typeValidator.setWhiteSpace("preserve"); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _colour - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_colour", "colour", org.exolab.castor.xml.NodeType.Attribute); - desc.setImmutable(true); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - return target.getColour(); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - target.setColour( (java.lang.String) value); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _colour - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - StringValidator typeValidator = new StringValidator(); - typeValidator.setWhiteSpace("preserve"); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _consThreshold - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_consThreshold", "consThreshold", org.exolab.castor.xml.NodeType.Attribute); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - if(!target.hasConsThreshold()) - return null; - return new java.lang.Integer(target.getConsThreshold()); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // if null, use delete method for optional primitives - if (value == null) { - target.deleteConsThreshold(); - return; - } - target.setConsThreshold( ((java.lang.Integer)value).intValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _consThreshold - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - IntegerValidator typeValidator= new IntegerValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _pidThreshold - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_pidThreshold", "pidThreshold", org.exolab.castor.xml.NodeType.Attribute); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - if(!target.hasPidThreshold()) - return null; - return new java.lang.Integer(target.getPidThreshold()); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // if null, use delete method for optional primitives - if (value == null) { - target.deletePidThreshold(); - return; - } - target.setPidThreshold( ((java.lang.Integer)value).intValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _pidThreshold - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - IntegerValidator typeValidator= new IntegerValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _outlineColour - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_outlineColour", "outlineColour", org.exolab.castor.xml.NodeType.Attribute); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - if(!target.hasOutlineColour()) - return null; - return new java.lang.Integer(target.getOutlineColour()); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // if null, use delete method for optional primitives - if (value == null) { - target.deleteOutlineColour(); - return; - } - target.setOutlineColour( ((java.lang.Integer)value).intValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _outlineColour - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - IntegerValidator typeValidator= new IntegerValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _displayBoxes - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_displayBoxes", "displayBoxes", org.exolab.castor.xml.NodeType.Attribute); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - if(!target.hasDisplayBoxes()) - return null; - return (target.getDisplayBoxes() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // if null, use delete method for optional primitives - if (value == null) { - target.deleteDisplayBoxes(); - return; - } - target.setDisplayBoxes( ((java.lang.Boolean)value).booleanValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _displayBoxes - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - BooleanValidator typeValidator = new BooleanValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _displayText - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_displayText", "displayText", org.exolab.castor.xml.NodeType.Attribute); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - if(!target.hasDisplayText()) - return null; - return (target.getDisplayText() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // if null, use delete method for optional primitives - if (value == null) { - target.deleteDisplayText(); - return; - } - target.setDisplayText( ((java.lang.Boolean)value).booleanValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _displayText - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - BooleanValidator typeValidator = new BooleanValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _colourText - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Boolean.TYPE, "_colourText", "colourText", org.exolab.castor.xml.NodeType.Attribute); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - if(!target.hasColourText()) - return null; - return (target.getColourText() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // if null, use delete method for optional primitives - if (value == null) { - target.deleteColourText(); - return; - } - target.setColourText( ((java.lang.Boolean)value).booleanValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _colourText - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - BooleanValidator typeValidator = new BooleanValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _textCol1 - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_textCol1", "textCol1", org.exolab.castor.xml.NodeType.Attribute); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - if(!target.hasTextCol1()) - return null; - return new java.lang.Integer(target.getTextCol1()); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // if null, use delete method for optional primitives - if (value == null) { - target.deleteTextCol1(); - return; - } - target.setTextCol1( ((java.lang.Integer)value).intValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _textCol1 - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - IntegerValidator typeValidator= new IntegerValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _textCol2 - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_textCol2", "textCol2", org.exolab.castor.xml.NodeType.Attribute); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - if(!target.hasTextCol2()) - return null; - return new java.lang.Integer(target.getTextCol2()); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // if null, use delete method for optional primitives - if (value == null) { - target.deleteTextCol2(); - return; - } - target.setTextCol2( ((java.lang.Integer)value).intValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _textCol2 - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - IntegerValidator typeValidator= new IntegerValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- _textColThreshold - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_textColThreshold", "textColThreshold", org.exolab.castor.xml.NodeType.Attribute); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - if(!target.hasTextColThreshold()) - return null; - return new java.lang.Integer(target.getTextColThreshold()); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // if null, use delete method for optional primitives - if (value == null) { - target.deleteTextColThreshold(); - return; - } - target.setTextColThreshold( ((java.lang.Integer)value).intValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - addFieldDescriptor(desc); - - //-- validation code for: _textColThreshold - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - { //-- local scope - IntegerValidator typeValidator= new IntegerValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - //-- initialize element descriptors - - //-- _seqList - desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.Integer.TYPE, "_seqList", "seq", org.exolab.castor.xml.NodeType.Element); - handler = (new org.exolab.castor.xml.XMLFieldHandler() { - public java.lang.Object getValue( java.lang.Object object ) - throws IllegalStateException - { - JGroup target = (JGroup) object; - return target.getSeq(); - } - public void setValue( java.lang.Object object, java.lang.Object value) - throws IllegalStateException, IllegalArgumentException - { - try { - JGroup target = (JGroup) object; - // ignore null values for non optional primitives - if (value == null) return; - - target.addSeq( ((java.lang.Integer)value).intValue()); - } - catch (java.lang.Exception ex) { - throw new IllegalStateException(ex.toString()); - } - } - public java.lang.Object newInstance( java.lang.Object parent ) { - return null; - } - } ); - desc.setHandler(handler); - desc.setNameSpaceURI("www.jalview.org"); - desc.setRequired(true); - desc.setMultivalued(true); - addFieldDescriptor(desc); - - //-- validation code for: _seqList - fieldValidator = new org.exolab.castor.xml.FieldValidator(); - fieldValidator.setMinOccurs(1); - { //-- local scope - IntegerValidator typeValidator= new IntegerValidator(); - fieldValidator.setValidator(typeValidator); - } - desc.setValidator(fieldValidator); - } //-- jalview.schemabinding.version2.JGroupDescriptor() - - - //-----------/ - //- Methods -/ - //-----------/ - - /** - * Method getAccessMode - * - * - * - * @return AccessMode - */ - public org.exolab.castor.mapping.AccessMode getAccessMode() +public class JGroupDescriptor + extends org.exolab.castor.xml.util.XMLClassDescriptorImpl +{ + + //--------------------------/ + //- Class/Member Variables -/ + //--------------------------/ + + /** + * Field nsPrefix + */ + private java.lang.String nsPrefix; + + /** + * Field nsURI + */ + private java.lang.String nsURI; + + /** + * Field xmlName + */ + private java.lang.String xmlName; + + /** + * Field identity + */ + private org.exolab.castor.xml.XMLFieldDescriptor identity; + + //----------------/ + //- Constructors -/ + //----------------/ + + public JGroupDescriptor() + { + super(); + nsURI = "www.jalview.org"; + xmlName = "JGroup"; + + //-- set grouping compositor + setCompositorAsSequence(); + org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null; + org.exolab.castor.xml.XMLFieldHandler handler = null; + org.exolab.castor.xml.FieldValidator fieldValidator = null; + //-- initialize attribute descriptors + + //-- _start + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Integer.TYPE, "_start", "start", + org.exolab.castor.xml.NodeType.Attribute); + handler = (new org.exolab.castor.xml.XMLFieldHandler() + { + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + if (!target.hasStart()) + { + return null; + } + return new java.lang.Integer(target.getStart()); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // if null, use delete method for optional primitives + if (value == null) + { + target.deleteStart(); + return; + } + target.setStart( ( (java.lang.Integer) value).intValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _start + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + IntegerValidator typeValidator = new IntegerValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _end + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Integer.TYPE, "_end", "end", org.exolab.castor.xml.NodeType.Attribute); + handler = (new org.exolab.castor.xml.XMLFieldHandler() + { + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + if (!target.hasEnd()) + { + return null; + } + return new java.lang.Integer(target.getEnd()); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // if null, use delete method for optional primitives + if (value == null) + { + target.deleteEnd(); + return; + } + target.setEnd( ( (java.lang.Integer) value).intValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _end + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + IntegerValidator typeValidator = new IntegerValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _name + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + String.class, "_name", "name", org.exolab.castor.xml.NodeType.Attribute); + desc.setImmutable(true); + handler = (new org.exolab.castor.xml.XMLFieldHandler() + { + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + return target.getName(); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + target.setName( (java.lang.String) value); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _name + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + StringValidator typeValidator = new StringValidator(); + typeValidator.setWhiteSpace("preserve"); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _colour + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + String.class, "_colour", "colour", + org.exolab.castor.xml.NodeType.Attribute); + desc.setImmutable(true); + handler = (new org.exolab.castor.xml.XMLFieldHandler() + { + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + return target.getColour(); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + target.setColour( (java.lang.String) value); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _colour + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + StringValidator typeValidator = new StringValidator(); + typeValidator.setWhiteSpace("preserve"); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _consThreshold + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Integer.TYPE, "_consThreshold", "consThreshold", + org.exolab.castor.xml.NodeType.Attribute); + handler = (new org.exolab.castor.xml.XMLFieldHandler() + { + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + if (!target.hasConsThreshold()) + { + return null; + } + return new java.lang.Integer(target.getConsThreshold()); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // if null, use delete method for optional primitives + if (value == null) + { + target.deleteConsThreshold(); + return; + } + target.setConsThreshold( ( (java.lang.Integer) value).intValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _consThreshold + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + IntegerValidator typeValidator = new IntegerValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _pidThreshold + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Integer.TYPE, "_pidThreshold", "pidThreshold", + org.exolab.castor.xml.NodeType.Attribute); + handler = (new org.exolab.castor.xml.XMLFieldHandler() { + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + if (!target.hasPidThreshold()) + { + return null; + } + return new java.lang.Integer(target.getPidThreshold()); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // if null, use delete method for optional primitives + if (value == null) + { + target.deletePidThreshold(); + return; + } + target.setPidThreshold( ( (java.lang.Integer) value).intValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _pidThreshold + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + IntegerValidator typeValidator = new IntegerValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _outlineColour + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Integer.TYPE, "_outlineColour", "outlineColour", + org.exolab.castor.xml.NodeType.Attribute); + handler = (new org.exolab.castor.xml.XMLFieldHandler() + { + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + if (!target.hasOutlineColour()) + { + return null; + } + return new java.lang.Integer(target.getOutlineColour()); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // if null, use delete method for optional primitives + if (value == null) + { + target.deleteOutlineColour(); + return; + } + target.setOutlineColour( ( (java.lang.Integer) value).intValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { return null; - } //-- org.exolab.castor.mapping.AccessMode getAccessMode() - - /** - * Method getExtends - * - * - * - * @return ClassDescriptor - */ - public org.exolab.castor.mapping.ClassDescriptor getExtends() + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _outlineColour + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + IntegerValidator typeValidator = new IntegerValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _displayBoxes + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Boolean.TYPE, "_displayBoxes", "displayBoxes", + org.exolab.castor.xml.NodeType.Attribute); + handler = (new org.exolab.castor.xml.XMLFieldHandler() { + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + if (!target.hasDisplayBoxes()) + { + return null; + } + return (target.getDisplayBoxes() ? java.lang.Boolean.TRUE : + java.lang.Boolean.FALSE); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // if null, use delete method for optional primitives + if (value == null) + { + target.deleteDisplayBoxes(); + return; + } + target.setDisplayBoxes( ( (java.lang.Boolean) value).booleanValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { return null; - } //-- org.exolab.castor.mapping.ClassDescriptor getExtends() - - /** - * Method getIdentity - * - * - * - * @return FieldDescriptor - */ - public org.exolab.castor.mapping.FieldDescriptor getIdentity() + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _displayBoxes + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + BooleanValidator typeValidator = new BooleanValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _displayText + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Boolean.TYPE, "_displayText", "displayText", + org.exolab.castor.xml.NodeType.Attribute); + handler = (new org.exolab.castor.xml.XMLFieldHandler() { - return identity; - } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity() - - /** - * Method getJavaClass - * - * - * - * @return Class - */ - public java.lang.Class getJavaClass() + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + if (!target.hasDisplayText()) + { + return null; + } + return (target.getDisplayText() ? java.lang.Boolean.TRUE : + java.lang.Boolean.FALSE); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // if null, use delete method for optional primitives + if (value == null) + { + target.deleteDisplayText(); + return; + } + target.setDisplayText( ( (java.lang.Boolean) value).booleanValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _displayText + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + BooleanValidator typeValidator = new BooleanValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _colourText + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Boolean.TYPE, "_colourText", "colourText", + org.exolab.castor.xml.NodeType.Attribute); + handler = (new org.exolab.castor.xml.XMLFieldHandler() { - return jalview.schemabinding.version2.JGroup.class; - } //-- java.lang.Class getJavaClass() - - /** - * Method getNameSpacePrefix - * - * - * - * @return String - */ - public java.lang.String getNameSpacePrefix() + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + if (!target.hasColourText()) + { + return null; + } + return (target.getColourText() ? java.lang.Boolean.TRUE : + java.lang.Boolean.FALSE); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // if null, use delete method for optional primitives + if (value == null) + { + target.deleteColourText(); + return; + } + target.setColourText( ( (java.lang.Boolean) value).booleanValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _colourText + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + BooleanValidator typeValidator = new BooleanValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _textCol1 + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Integer.TYPE, "_textCol1", "textCol1", + org.exolab.castor.xml.NodeType.Attribute); + handler = (new org.exolab.castor.xml.XMLFieldHandler() { - return nsPrefix; - } //-- java.lang.String getNameSpacePrefix() - - /** - * Method getNameSpaceURI - * - * - * - * @return String - */ - public java.lang.String getNameSpaceURI() + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + if (!target.hasTextCol1()) + { + return null; + } + return new java.lang.Integer(target.getTextCol1()); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // if null, use delete method for optional primitives + if (value == null) + { + target.deleteTextCol1(); + return; + } + target.setTextCol1( ( (java.lang.Integer) value).intValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _textCol1 + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + IntegerValidator typeValidator = new IntegerValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _textCol2 + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Integer.TYPE, "_textCol2", "textCol2", + org.exolab.castor.xml.NodeType.Attribute); + handler = (new org.exolab.castor.xml.XMLFieldHandler() { - return nsURI; - } //-- java.lang.String getNameSpaceURI() - - /** - * Method getValidator - * - * - * - * @return TypeValidator - */ - public org.exolab.castor.xml.TypeValidator getValidator() + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + if (!target.hasTextCol2()) + { + return null; + } + return new java.lang.Integer(target.getTextCol2()); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // if null, use delete method for optional primitives + if (value == null) + { + target.deleteTextCol2(); + return; + } + target.setTextCol2( ( (java.lang.Integer) value).intValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _textCol2 + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + IntegerValidator typeValidator = new IntegerValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- _textColThreshold + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Integer.TYPE, "_textColThreshold", "textColThreshold", + org.exolab.castor.xml.NodeType.Attribute); + handler = (new org.exolab.castor.xml.XMLFieldHandler() { - return this; - } //-- org.exolab.castor.xml.TypeValidator getValidator() - - /** - * Method getXMLName - * - * - * - * @return String - */ - public java.lang.String getXMLName() + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + if (!target.hasTextColThreshold()) + { + return null; + } + return new java.lang.Integer(target.getTextColThreshold()); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // if null, use delete method for optional primitives + if (value == null) + { + target.deleteTextColThreshold(); + return; + } + target.setTextColThreshold( ( (java.lang.Integer) value).intValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + addFieldDescriptor(desc); + + //-- validation code for: _textColThreshold + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + { //-- local scope + IntegerValidator typeValidator = new IntegerValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + //-- initialize element descriptors + + //-- _seqList + desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. + Integer.TYPE, "_seqList", "seq", org.exolab.castor.xml.NodeType.Element); + handler = (new org.exolab.castor.xml.XMLFieldHandler() { - return xmlName; - } //-- java.lang.String getXMLName() + public java.lang.Object getValue(java.lang.Object object) + throws IllegalStateException + { + JGroup target = (JGroup) object; + return target.getSeq(); + } + + public void setValue(java.lang.Object object, java.lang.Object value) + throws IllegalStateException, IllegalArgumentException + { + try + { + JGroup target = (JGroup) object; + // ignore null values for non optional primitives + if (value == null) + { + return; + } + + target.addSeq( ( (java.lang.Integer) value).intValue()); + } + catch (java.lang.Exception ex) + { + throw new IllegalStateException(ex.toString()); + } + } + + public java.lang.Object newInstance(java.lang.Object parent) + { + return null; + } + }); + desc.setHandler(handler); + desc.setNameSpaceURI("www.jalview.org"); + desc.setRequired(true); + desc.setMultivalued(true); + addFieldDescriptor(desc); + + //-- validation code for: _seqList + fieldValidator = new org.exolab.castor.xml.FieldValidator(); + fieldValidator.setMinOccurs(1); + { //-- local scope + IntegerValidator typeValidator = new IntegerValidator(); + fieldValidator.setValidator(typeValidator); + } + desc.setValidator(fieldValidator); + } //-- jalview.schemabinding.version2.JGroupDescriptor() + + //-----------/ + //- Methods -/ + //-----------/ + + /** + * Method getAccessMode + * + * + * + * @return AccessMode + */ + public org.exolab.castor.mapping.AccessMode getAccessMode() + { + return null; + } //-- org.exolab.castor.mapping.AccessMode getAccessMode() + + /** + * Method getExtends + * + * + * + * @return ClassDescriptor + */ + public org.exolab.castor.mapping.ClassDescriptor getExtends() + { + return null; + } //-- org.exolab.castor.mapping.ClassDescriptor getExtends() + + /** + * Method getIdentity + * + * + * + * @return FieldDescriptor + */ + public org.exolab.castor.mapping.FieldDescriptor getIdentity() + { + return identity; + } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity() + + /** + * Method getJavaClass + * + * + * + * @return Class + */ + public java.lang.Class getJavaClass() + { + return jalview.schemabinding.version2.JGroup.class; + } //-- java.lang.Class getJavaClass() + + /** + * Method getNameSpacePrefix + * + * + * + * @return String + */ + public java.lang.String getNameSpacePrefix() + { + return nsPrefix; + } //-- java.lang.String getNameSpacePrefix() + + /** + * Method getNameSpaceURI + * + * + * + * @return String + */ + public java.lang.String getNameSpaceURI() + { + return nsURI; + } //-- java.lang.String getNameSpaceURI() + + /** + * Method getValidator + * + * + * + * @return TypeValidator + */ + public org.exolab.castor.xml.TypeValidator getValidator() + { + return this; + } //-- org.exolab.castor.xml.TypeValidator getValidator() + + /** + * Method getXMLName + * + * + * + * @return String + */ + public java.lang.String getXMLName() + { + return xmlName; + } //-- java.lang.String getXMLName() }