X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2FSequenceDescriptor.java;h=8c621ca2816f4e71ef974b303c8daa482531dbb5;hb=7bc226b58110fa26d9dbd3f0c78095d06909ffc3;hp=555284aea16208ec47fb4f843ceaa30a9c838465;hpb=dd74fc4938723fe5ec48d4e5fdcfbe58ac42a48d;p=jalview.git

diff --git a/src/jalview/schemabinding/version2/SequenceDescriptor.java b/src/jalview/schemabinding/version2/SequenceDescriptor.java
index 555284a..8c621ca 100755
--- a/src/jalview/schemabinding/version2/SequenceDescriptor.java
+++ b/src/jalview/schemabinding/version2/SequenceDescriptor.java
@@ -1,5 +1,5 @@
 /*
- * This class was automatically generated with 
+ * This class was automatically generated with
  * <a href="http://www.castor.org">Castor 0.9.6</a>, using an XML
  * Schema.
  * $Id$
@@ -7,205 +7,213 @@
 
 package jalview.schemabinding.version2;
 
-  //---------------------------------/
- //- Imported classes and packages -/
 //---------------------------------/
+//- Imported classes and packages -/
+//---------------------------------/
+
 
-import org.exolab.castor.mapping.AccessMode;
-import org.exolab.castor.xml.TypeValidator;
-import org.exolab.castor.xml.XMLFieldDescriptor;
-import org.exolab.castor.xml.validators.*;
 
 /**
  * Class SequenceDescriptor.
- * 
+ *
  * @version $Revision$ $Date$
  */
-public class SequenceDescriptor extends jalview.schemabinding.version2.SequenceTypeDescriptor {
-
-
-      //--------------------------/
-     //- Class/Member Variables -/
-    //--------------------------/
-
-    /**
-     * Field nsPrefix
-     */
-    private java.lang.String nsPrefix;
-
-    /**
-     * Field nsURI
-     */
-    private java.lang.String nsURI;
-
-    /**
-     * Field xmlName
-     */
-    private java.lang.String xmlName;
-
-    /**
-     * Field identity
-     */
-    private org.exolab.castor.xml.XMLFieldDescriptor identity;
-
-
-      //----------------/
-     //- Constructors -/
-    //----------------/
-
-    public SequenceDescriptor() {
-        super();
-        setExtendsWithoutFlatten(new jalview.schemabinding.version2.SequenceTypeDescriptor());
-        nsURI = "www.vamsas.ac.uk/jalview/version2";
-        xmlName = "Sequence";
-        
-        //-- set grouping compositor
-        setCompositorAsSequence();
-        org.exolab.castor.xml.util.XMLFieldDescriptorImpl  desc           = null;
-        org.exolab.castor.xml.XMLFieldHandler              handler        = null;
-        org.exolab.castor.xml.FieldValidator               fieldValidator = null;
-        //-- initialize attribute descriptors
-        
-        //-- initialize element descriptors
-        
-        //-- _DBRefList
-        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.DBRef.class, "_DBRefList", "DBRef", org.exolab.castor.xml.NodeType.Element);
-        handler = (new org.exolab.castor.xml.XMLFieldHandler() {
-            public java.lang.Object getValue( java.lang.Object object ) 
-                throws IllegalStateException
-            {
-                Sequence target = (Sequence) object;
-                return target.getDBRef();
-            }
-            public void setValue( java.lang.Object object, java.lang.Object value) 
-                throws IllegalStateException, IllegalArgumentException
-            {
-                try {
-                    Sequence target = (Sequence) object;
-                    target.addDBRef( (jalview.schemabinding.version2.DBRef) value);
-                }
-                catch (java.lang.Exception ex) {
-                    throw new IllegalStateException(ex.toString());
-                }
-            }
-            public java.lang.Object newInstance( java.lang.Object parent ) {
-                return new jalview.schemabinding.version2.DBRef();
-            }
-        } );
-        desc.setHandler(handler);
-        desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
-        desc.setMultivalued(true);
-        addFieldDescriptor(desc);
-        
-        //-- validation code for: _DBRefList
-        fieldValidator = new org.exolab.castor.xml.FieldValidator();
-        fieldValidator.setMinOccurs(0);
-        { //-- local scope
-        }
-        desc.setValidator(fieldValidator);
-    } //-- jalview.schemabinding.version2.SequenceDescriptor()
-
-
-      //-----------/
-     //- Methods -/
-    //-----------/
-
-    /**
-     * Method getAccessMode
-     * 
-     * 
-     * 
-     * @return AccessMode
-     */
-    public org.exolab.castor.mapping.AccessMode getAccessMode()
-    {
-        return null;
-    } //-- org.exolab.castor.mapping.AccessMode getAccessMode() 
-
-    /**
-     * Method getExtends
-     * 
-     * 
-     * 
-     * @return ClassDescriptor
-     */
-    public org.exolab.castor.mapping.ClassDescriptor getExtends()
-    {
-        return super.getExtends();
-    } //-- org.exolab.castor.mapping.ClassDescriptor getExtends() 
-
-    /**
-     * Method getIdentity
-     * 
-     * 
-     * 
-     * @return FieldDescriptor
-     */
-    public org.exolab.castor.mapping.FieldDescriptor getIdentity()
-    {
-        if (identity == null)
-            return super.getIdentity();
-        return identity;
-    } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity() 
-
-    /**
-     * Method getJavaClass
-     * 
-     * 
-     * 
-     * @return Class
-     */
-    public java.lang.Class getJavaClass()
+public class SequenceDescriptor
+    extends jalview.schemabinding.version2.SequenceTypeDescriptor
+{
+
+  //--------------------------/
+  //- Class/Member Variables -/
+  //--------------------------/
+
+  /**
+   * Field nsPrefix
+   */
+  private java.lang.String nsPrefix;
+
+  /**
+   * Field nsURI
+   */
+  private java.lang.String nsURI;
+
+  /**
+   * Field xmlName
+   */
+  private java.lang.String xmlName;
+
+  /**
+   * Field identity
+   */
+  private org.exolab.castor.xml.XMLFieldDescriptor identity;
+
+  //----------------/
+  //- Constructors -/
+  //----------------/
+
+  public SequenceDescriptor()
+  {
+    super();
+    setExtendsWithoutFlatten(new jalview.schemabinding.version2.
+                             SequenceTypeDescriptor());
+    nsURI = "www.vamsas.ac.uk/jalview/version2";
+    xmlName = "Sequence";
+
+    //-- set grouping compositor
+    setCompositorAsSequence();
+    org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
+    org.exolab.castor.xml.XMLFieldHandler handler = null;
+    org.exolab.castor.xml.FieldValidator fieldValidator = null;
+    //-- initialize attribute descriptors
+
+    //-- initialize element descriptors
+
+    //-- _DBRefList
+    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.
+        schemabinding.version2.DBRef.class, "_DBRefList", "DBRef",
+        org.exolab.castor.xml.NodeType.Element);
+    handler = (new org.exolab.castor.xml.XMLFieldHandler()
     {
-        return jalview.schemabinding.version2.Sequence.class;
-    } //-- java.lang.Class getJavaClass() 
-
-    /**
-     * Method getNameSpacePrefix
-     * 
-     * 
-     * 
-     * @return String
-     */
-    public java.lang.String getNameSpacePrefix()
-    {
-        return nsPrefix;
-    } //-- java.lang.String getNameSpacePrefix() 
-
-    /**
-     * Method getNameSpaceURI
-     * 
-     * 
-     * 
-     * @return String
-     */
-    public java.lang.String getNameSpaceURI()
-    {
-        return nsURI;
-    } //-- java.lang.String getNameSpaceURI() 
-
-    /**
-     * Method getValidator
-     * 
-     * 
-     * 
-     * @return TypeValidator
-     */
-    public org.exolab.castor.xml.TypeValidator getValidator()
-    {
-        return this;
-    } //-- org.exolab.castor.xml.TypeValidator getValidator() 
-
-    /**
-     * Method getXMLName
-     * 
-     * 
-     * 
-     * @return String
-     */
-    public java.lang.String getXMLName()
+      public java.lang.Object getValue(java.lang.Object object)
+          throws IllegalStateException
+      {
+        Sequence target = (Sequence) object;
+        return target.getDBRef();
+      }
+
+      public void setValue(java.lang.Object object, java.lang.Object value)
+          throws IllegalStateException, IllegalArgumentException
+      {
+        try
+        {
+          Sequence target = (Sequence) object;
+          target.addDBRef( (jalview.schemabinding.version2.DBRef) value);
+        }
+        catch (java.lang.Exception ex)
+        {
+          throw new IllegalStateException(ex.toString());
+        }
+      }
+
+      public java.lang.Object newInstance(java.lang.Object parent)
+      {
+        return new jalview.schemabinding.version2.DBRef();
+      }
+    });
+    desc.setHandler(handler);
+    desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
+    desc.setMultivalued(true);
+    addFieldDescriptor(desc);
+
+    //-- validation code for: _DBRefList
+    fieldValidator = new org.exolab.castor.xml.FieldValidator();
+    fieldValidator.setMinOccurs(0);
+    { //-- local scope
+    }
+    desc.setValidator(fieldValidator);
+  } //-- jalview.schemabinding.version2.SequenceDescriptor()
+
+  //-----------/
+  //- Methods -/
+  //-----------/
+
+  /**
+   * Method getAccessMode
+   *
+   *
+   *
+   * @return AccessMode
+   */
+  public org.exolab.castor.mapping.AccessMode getAccessMode()
+  {
+    return null;
+  } //-- org.exolab.castor.mapping.AccessMode getAccessMode()
+
+  /**
+   * Method getExtends
+   *
+   *
+   *
+   * @return ClassDescriptor
+   */
+  public org.exolab.castor.mapping.ClassDescriptor getExtends()
+  {
+    return super.getExtends();
+  } //-- org.exolab.castor.mapping.ClassDescriptor getExtends()
+
+  /**
+   * Method getIdentity
+   *
+   *
+   *
+   * @return FieldDescriptor
+   */
+  public org.exolab.castor.mapping.FieldDescriptor getIdentity()
+  {
+    if (identity == null)
     {
-        return xmlName;
-    } //-- java.lang.String getXMLName() 
+      return super.getIdentity();
+    }
+    return identity;
+  } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity()
+
+  /**
+   * Method getJavaClass
+   *
+   *
+   *
+   * @return Class
+   */
+  public java.lang.Class getJavaClass()
+  {
+    return jalview.schemabinding.version2.Sequence.class;
+  } //-- java.lang.Class getJavaClass()
+
+  /**
+   * Method getNameSpacePrefix
+   *
+   *
+   *
+   * @return String
+   */
+  public java.lang.String getNameSpacePrefix()
+  {
+    return nsPrefix;
+  } //-- java.lang.String getNameSpacePrefix()
+
+  /**
+   * Method getNameSpaceURI
+   *
+   *
+   *
+   * @return String
+   */
+  public java.lang.String getNameSpaceURI()
+  {
+    return nsURI;
+  } //-- java.lang.String getNameSpaceURI()
+
+  /**
+   * Method getValidator
+   *
+   *
+   *
+   * @return TypeValidator
+   */
+  public org.exolab.castor.xml.TypeValidator getValidator()
+  {
+    return this;
+  } //-- org.exolab.castor.xml.TypeValidator getValidator()
+
+  /**
+   * Method getXMLName
+   *
+   *
+   *
+   * @return String
+   */
+  public java.lang.String getXMLName()
+  {
+    return xmlName;
+  } //-- java.lang.String getXMLName()
 
 }