X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2FSequenceType.java;h=c8e54c8751875fb74274a7f1edf6fd6ff8a62474;hb=0233fbee0ff0d7fad302aa2da743c51fd64be101;hp=d413e2dadc44cd4e346d6bd02ad13280d6c6ebff;hpb=65df62f4b048a1615d32ea2c3576082ad2b63af8;p=jalview.git diff --git a/src/jalview/schemabinding/version2/SequenceType.java b/src/jalview/schemabinding/version2/SequenceType.java index d413e2d..c8e54c8 100755 --- a/src/jalview/schemabinding/version2/SequenceType.java +++ b/src/jalview/schemabinding/version2/SequenceType.java @@ -1,25 +1,29 @@ /* - * This class was automatically generated with - * Castor 0.9.6, using an XML - * Schema. - * $Id$ + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4.1) + * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle + * + * This program is free software; you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation; either version 2 + * of the License, or (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program; if not, write to the Free Software + * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA */ - package jalview.schemabinding.version2; //---------------------------------/ //- Imported classes and packages -/ //---------------------------------/ -import java.io.IOException; -import java.io.Reader; -import java.io.Serializable; -import java.io.Writer; -import org.exolab.castor.xml.MarshalException; import org.exolab.castor.xml.Marshaller; import org.exolab.castor.xml.Unmarshaller; -import org.exolab.castor.xml.ValidationException; -import org.xml.sax.ContentHandler; /** * Class SequenceType. @@ -34,22 +38,22 @@ public class SequenceType implements java.io.Serializable { //--------------------------/ /** - * Field _id + * Field _id. */ private java.lang.String _id; /** - * Field _description + * Field _description. */ private java.lang.String _description; /** - * Field _sequence + * Field _sequence. */ private java.lang.String _sequence; /** - * Field _name + * Field _name. */ private java.lang.String _name; @@ -60,7 +64,7 @@ public class SequenceType implements java.io.Serializable { public SequenceType() { super(); - } //-- jalview.schemabinding.version2.SequenceType() + } //-----------/ @@ -70,156 +74,158 @@ public class SequenceType implements java.io.Serializable { /** * Returns the value of field 'description'. * - * @return String - * @return the value of field 'description'. + * @return the value of field 'Description'. */ - public java.lang.String getDescription() - { + public java.lang.String getDescription( + ) { return this._description; - } //-- java.lang.String getDescription() + } /** * Returns the value of field 'id'. * - * @return String - * @return the value of field 'id'. + * @return the value of field 'Id'. */ - public java.lang.String getId() - { + public java.lang.String getId( + ) { return this._id; - } //-- java.lang.String getId() + } /** * Returns the value of field 'name'. * - * @return String - * @return the value of field 'name'. + * @return the value of field 'Name'. */ - public java.lang.String getName() - { + public java.lang.String getName( + ) { return this._name; - } //-- java.lang.String getName() + } /** * Returns the value of field 'sequence'. * - * @return String - * @return the value of field 'sequence'. + * @return the value of field 'Sequence'. */ - public java.lang.String getSequence() - { + public java.lang.String getSequence( + ) { return this._sequence; - } //-- java.lang.String getSequence() + } /** - * Method isValid + * Method isValid. * - * - * - * @return boolean + * @return true if this object is valid according to the schema */ - public boolean isValid() - { + public boolean isValid( + ) { try { validate(); - } - catch (org.exolab.castor.xml.ValidationException vex) { + } catch (org.exolab.castor.xml.ValidationException vex) { return false; } return true; - } //-- boolean isValid() + } /** - * Method marshal - * * * * @param out - */ - public void marshal(java.io.Writer out) - throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException - { - + * @throws org.exolab.castor.xml.MarshalException if object is + * null or if any SAXException is thrown during marshaling + * @throws org.exolab.castor.xml.ValidationException if this + * object is an invalid instance according to the schema + */ + public void marshal( + final java.io.Writer out) + throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, out); - } //-- void marshal(java.io.Writer) + } /** - * Method marshal - * * * * @param handler - */ - public void marshal(org.xml.sax.ContentHandler handler) - throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException - { - + * @throws java.io.IOException if an IOException occurs during + * marshaling + * @throws org.exolab.castor.xml.ValidationException if this + * object is an invalid instance according to the schema + * @throws org.exolab.castor.xml.MarshalException if object is + * null or if any SAXException is thrown during marshaling + */ + public void marshal( + final org.xml.sax.ContentHandler handler) + throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, handler); - } //-- void marshal(org.xml.sax.ContentHandler) + } /** * Sets the value of field 'description'. * * @param description the value of field 'description'. */ - public void setDescription(java.lang.String description) - { + public void setDescription( + final java.lang.String description) { this._description = description; - } //-- void setDescription(java.lang.String) + } /** * Sets the value of field 'id'. * * @param id the value of field 'id'. */ - public void setId(java.lang.String id) - { + public void setId( + final java.lang.String id) { this._id = id; - } //-- void setId(java.lang.String) + } /** * Sets the value of field 'name'. * * @param name the value of field 'name'. */ - public void setName(java.lang.String name) - { + public void setName( + final java.lang.String name) { this._name = name; - } //-- void setName(java.lang.String) + } /** * Sets the value of field 'sequence'. * * @param sequence the value of field 'sequence'. */ - public void setSequence(java.lang.String sequence) - { + public void setSequence( + final java.lang.String sequence) { this._sequence = sequence; - } //-- void setSequence(java.lang.String) + } /** - * Method unmarshal - * - * + * Method unmarshal. * * @param reader - * @return Object - */ - public static java.lang.Object unmarshal(java.io.Reader reader) - throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException - { + * @throws org.exolab.castor.xml.MarshalException if object is + * null or if any SAXException is thrown during marshaling + * @throws org.exolab.castor.xml.ValidationException if this + * object is an invalid instance according to the schema + * @return the unmarshaled + * jalview.schemabinding.version2.SequenceType + */ + public static jalview.schemabinding.version2.SequenceType unmarshal( + final java.io.Reader reader) + throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { return (jalview.schemabinding.version2.SequenceType) Unmarshaller.unmarshal(jalview.schemabinding.version2.SequenceType.class, reader); - } //-- java.lang.Object unmarshal(java.io.Reader) + } /** - * Method validate * + * + * @throws org.exolab.castor.xml.ValidationException if this + * object is an invalid instance according to the schema */ - public void validate() - throws org.exolab.castor.xml.ValidationException - { + public void validate( + ) + throws org.exolab.castor.xml.ValidationException { org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); validator.validate(this); - } //-- void validate() + } }