X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2FViewport.java;h=6dfb14fe72e32b8abffc2eea44308318ad127d70;hb=371f4bc519ea38c78f1c6f003df82769c130ac2e;hp=24adba5dc9af316d8acfea27840d589ea51713ef;hpb=24681b2bc3e0cdc0d77dd73cad05deea14264fab;p=jalview.git diff --git a/src/jalview/schemabinding/version2/Viewport.java b/src/jalview/schemabinding/version2/Viewport.java index 24adba5..6dfb14f 100755 --- a/src/jalview/schemabinding/version2/Viewport.java +++ b/src/jalview/schemabinding/version2/Viewport.java @@ -96,6 +96,16 @@ public class Viewport implements java.io.Serializable { private boolean _has_showFullId; /** + * Field _rightAlignIds + */ + private boolean _rightAlignIds; + + /** + * keeps track of state for field: _rightAlignIds + */ + private boolean _has_rightAlignIds; + + /** * Field _showText */ private boolean _showText; @@ -166,36 +176,6 @@ public class Viewport implements java.io.Serializable { private boolean _has_showAnnotation; /** - * Field _showConservation - */ - private boolean _showConservation; - - /** - * keeps track of state for field: _showConservation - */ - private boolean _has_showConservation; - - /** - * Field _showQuality - */ - private boolean _showQuality; - - /** - * keeps track of state for field: _showQuality - */ - private boolean _has_showQuality; - - /** - * Field _showIdentity - */ - private boolean _showIdentity; - - /** - * keeps track of state for field: _showIdentity - */ - private boolean _has_showIdentity; - - /** * Field _xpos */ private int _xpos; @@ -301,6 +281,36 @@ public class Viewport implements java.io.Serializable { private boolean _has_gatheredViews; /** + * Field _textCol1 + */ + private int _textCol1; + + /** + * keeps track of state for field: _textCol1 + */ + private boolean _has_textCol1; + + /** + * Field _textCol2 + */ + private int _textCol2; + + /** + * keeps track of state for field: _textCol2 + */ + private boolean _has_textCol2; + + /** + * Field _textColThreshold + */ + private int _textColThreshold; + + /** + * keeps track of state for field: _textColThreshold + */ + private boolean _has_textColThreshold; + + /** * Field _annotationColours */ private jalview.schemabinding.version2.AnnotationColours _annotationColours; @@ -434,6 +444,15 @@ public class Viewport implements java.io.Serializable { } //-- void deleteRenderGaps() /** + * Method deleteRightAlignIds + * + */ + public void deleteRightAlignIds() + { + this._has_rightAlignIds= false; + } //-- void deleteRightAlignIds() + + /** * Method deleteShowAnnotation * */ @@ -461,15 +480,6 @@ public class Viewport implements java.io.Serializable { } //-- void deleteShowColourText() /** - * Method deleteShowConservation - * - */ - public void deleteShowConservation() - { - this._has_showConservation= false; - } //-- void deleteShowConservation() - - /** * Method deleteShowFullId * */ @@ -479,24 +489,6 @@ public class Viewport implements java.io.Serializable { } //-- void deleteShowFullId() /** - * Method deleteShowIdentity - * - */ - public void deleteShowIdentity() - { - this._has_showIdentity= false; - } //-- void deleteShowIdentity() - - /** - * Method deleteShowQuality - * - */ - public void deleteShowQuality() - { - this._has_showQuality= false; - } //-- void deleteShowQuality() - - /** * Method deleteShowSequenceFeatures * */ @@ -533,6 +525,33 @@ public class Viewport implements java.io.Serializable { } //-- void deleteStartSeq() /** + * Method deleteTextCol1 + * + */ + public void deleteTextCol1() + { + this._has_textCol1= false; + } //-- void deleteTextCol1() + + /** + * Method deleteTextCol2 + * + */ + public void deleteTextCol2() + { + this._has_textCol2= false; + } //-- void deleteTextCol2() + + /** + * Method deleteTextColThreshold + * + */ + public void deleteTextColThreshold() + { + this._has_textColThreshold= false; + } //-- void deleteTextColThreshold() + + /** * Method deleteWidth * */ @@ -761,6 +780,17 @@ public class Viewport implements java.io.Serializable { } //-- boolean getRenderGaps() /** + * Returns the value of field 'rightAlignIds'. + * + * @return boolean + * @return the value of field 'rightAlignIds'. + */ + public boolean getRightAlignIds() + { + return this._rightAlignIds; + } //-- boolean getRightAlignIds() + + /** * Returns the value of field 'sequenceSetId'. * * @return String @@ -805,17 +835,6 @@ public class Viewport implements java.io.Serializable { } //-- boolean getShowColourText() /** - * Returns the value of field 'showConservation'. - * - * @return boolean - * @return the value of field 'showConservation'. - */ - public boolean getShowConservation() - { - return this._showConservation; - } //-- boolean getShowConservation() - - /** * Returns the value of field 'showFullId'. * * @return boolean @@ -827,28 +846,6 @@ public class Viewport implements java.io.Serializable { } //-- boolean getShowFullId() /** - * Returns the value of field 'showIdentity'. - * - * @return boolean - * @return the value of field 'showIdentity'. - */ - public boolean getShowIdentity() - { - return this._showIdentity; - } //-- boolean getShowIdentity() - - /** - * Returns the value of field 'showQuality'. - * - * @return boolean - * @return the value of field 'showQuality'. - */ - public boolean getShowQuality() - { - return this._showQuality; - } //-- boolean getShowQuality() - - /** * Returns the value of field 'showSequenceFeatures'. * * @return boolean @@ -893,6 +890,39 @@ public class Viewport implements java.io.Serializable { } //-- int getStartSeq() /** + * Returns the value of field 'textCol1'. + * + * @return int + * @return the value of field 'textCol1'. + */ + public int getTextCol1() + { + return this._textCol1; + } //-- int getTextCol1() + + /** + * Returns the value of field 'textCol2'. + * + * @return int + * @return the value of field 'textCol2'. + */ + public int getTextCol2() + { + return this._textCol2; + } //-- int getTextCol2() + + /** + * Returns the value of field 'textColThreshold'. + * + * @return int + * @return the value of field 'textColThreshold'. + */ + public int getTextColThreshold() + { + return this._textColThreshold; + } //-- int getTextColThreshold() + + /** * Returns the value of field 'title'. * * @return String @@ -1067,6 +1097,18 @@ public class Viewport implements java.io.Serializable { } //-- boolean hasRenderGaps() /** + * Method hasRightAlignIds + * + * + * + * @return boolean + */ + public boolean hasRightAlignIds() + { + return this._has_rightAlignIds; + } //-- boolean hasRightAlignIds() + + /** * Method hasShowAnnotation * * @@ -1103,100 +1145,100 @@ public class Viewport implements java.io.Serializable { } //-- boolean hasShowColourText() /** - * Method hasShowConservation + * Method hasShowFullId * * * * @return boolean */ - public boolean hasShowConservation() + public boolean hasShowFullId() { - return this._has_showConservation; - } //-- boolean hasShowConservation() + return this._has_showFullId; + } //-- boolean hasShowFullId() /** - * Method hasShowFullId + * Method hasShowSequenceFeatures * * * * @return boolean */ - public boolean hasShowFullId() + public boolean hasShowSequenceFeatures() { - return this._has_showFullId; - } //-- boolean hasShowFullId() + return this._has_showSequenceFeatures; + } //-- boolean hasShowSequenceFeatures() /** - * Method hasShowIdentity + * Method hasShowText * * * * @return boolean */ - public boolean hasShowIdentity() + public boolean hasShowText() { - return this._has_showIdentity; - } //-- boolean hasShowIdentity() + return this._has_showText; + } //-- boolean hasShowText() /** - * Method hasShowQuality + * Method hasStartRes * * * * @return boolean */ - public boolean hasShowQuality() + public boolean hasStartRes() { - return this._has_showQuality; - } //-- boolean hasShowQuality() + return this._has_startRes; + } //-- boolean hasStartRes() /** - * Method hasShowSequenceFeatures + * Method hasStartSeq * * * * @return boolean */ - public boolean hasShowSequenceFeatures() + public boolean hasStartSeq() { - return this._has_showSequenceFeatures; - } //-- boolean hasShowSequenceFeatures() + return this._has_startSeq; + } //-- boolean hasStartSeq() /** - * Method hasShowText + * Method hasTextCol1 * * * * @return boolean */ - public boolean hasShowText() + public boolean hasTextCol1() { - return this._has_showText; - } //-- boolean hasShowText() + return this._has_textCol1; + } //-- boolean hasTextCol1() /** - * Method hasStartRes + * Method hasTextCol2 * * * * @return boolean */ - public boolean hasStartRes() + public boolean hasTextCol2() { - return this._has_startRes; - } //-- boolean hasStartRes() + return this._has_textCol2; + } //-- boolean hasTextCol2() /** - * Method hasStartSeq + * Method hasTextColThreshold * * * * @return boolean */ - public boolean hasStartSeq() + public boolean hasTextColThreshold() { - return this._has_startSeq; - } //-- boolean hasStartSeq() + return this._has_textColThreshold; + } //-- boolean hasTextColThreshold() /** * Method hasWidth @@ -1482,6 +1524,17 @@ public class Viewport implements java.io.Serializable { } //-- void setRenderGaps(boolean) /** + * Sets the value of field 'rightAlignIds'. + * + * @param rightAlignIds the value of field 'rightAlignIds'. + */ + public void setRightAlignIds(boolean rightAlignIds) + { + this._rightAlignIds = rightAlignIds; + this._has_rightAlignIds = true; + } //-- void setRightAlignIds(boolean) + + /** * Sets the value of field 'sequenceSetId'. * * @param sequenceSetId the value of field 'sequenceSetId'. @@ -1525,17 +1578,6 @@ public class Viewport implements java.io.Serializable { } //-- void setShowColourText(boolean) /** - * Sets the value of field 'showConservation'. - * - * @param showConservation the value of field 'showConservation' - */ - public void setShowConservation(boolean showConservation) - { - this._showConservation = showConservation; - this._has_showConservation = true; - } //-- void setShowConservation(boolean) - - /** * Sets the value of field 'showFullId'. * * @param showFullId the value of field 'showFullId'. @@ -1547,28 +1589,6 @@ public class Viewport implements java.io.Serializable { } //-- void setShowFullId(boolean) /** - * Sets the value of field 'showIdentity'. - * - * @param showIdentity the value of field 'showIdentity'. - */ - public void setShowIdentity(boolean showIdentity) - { - this._showIdentity = showIdentity; - this._has_showIdentity = true; - } //-- void setShowIdentity(boolean) - - /** - * Sets the value of field 'showQuality'. - * - * @param showQuality the value of field 'showQuality'. - */ - public void setShowQuality(boolean showQuality) - { - this._showQuality = showQuality; - this._has_showQuality = true; - } //-- void setShowQuality(boolean) - - /** * Sets the value of field 'showSequenceFeatures'. * * @param showSequenceFeatures the value of field @@ -1614,6 +1634,39 @@ public class Viewport implements java.io.Serializable { } //-- void setStartSeq(int) /** + * Sets the value of field 'textCol1'. + * + * @param textCol1 the value of field 'textCol1'. + */ + public void setTextCol1(int textCol1) + { + this._textCol1 = textCol1; + this._has_textCol1 = true; + } //-- void setTextCol1(int) + + /** + * Sets the value of field 'textCol2'. + * + * @param textCol2 the value of field 'textCol2'. + */ + public void setTextCol2(int textCol2) + { + this._textCol2 = textCol2; + this._has_textCol2 = true; + } //-- void setTextCol2(int) + + /** + * Sets the value of field 'textColThreshold'. + * + * @param textColThreshold the value of field 'textColThreshold' + */ + public void setTextColThreshold(int textColThreshold) + { + this._textColThreshold = textColThreshold; + this._has_textColThreshold = true; + } //-- void setTextColThreshold(int) + + /** * Sets the value of field 'title'. * * @param title the value of field 'title'.