X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemabinding%2Fversion2%2Fdescriptors%2FSequenceSetDescriptor.java;h=aa0c798fb1ab020d76e28bd9c3cdc4a62fc51f13;hb=a96d51f58325f8429c5792ae554243de5628d62a;hp=ca59cf3a0a40f36237c501b4b7652b106db61e76;hpb=a8a3ca19aa9240b9d816ed9e7dc8be45209989ae;p=jalview.git

diff --git a/src/jalview/schemabinding/version2/descriptors/SequenceSetDescriptor.java b/src/jalview/schemabinding/version2/descriptors/SequenceSetDescriptor.java
index ca59cf3..aa0c798 100644
--- a/src/jalview/schemabinding/version2/descriptors/SequenceSetDescriptor.java
+++ b/src/jalview/schemabinding/version2/descriptors/SequenceSetDescriptor.java
@@ -102,6 +102,43 @@ public class SequenceSetDescriptor extends org.exolab.castor.xml.util.XMLClassDe
             typeValidator.setWhiteSpace("preserve");
         }
         desc.setValidator(fieldValidator);
+        //-- _datasetId
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang.String.class, "_datasetId", "datasetId", org.exolab.castor.xml.NodeType.Attribute);
+        desc.setImmutable(true);
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                SequenceSet target = (SequenceSet) object;
+                return target.getDatasetId();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    SequenceSet target = (SequenceSet) object;
+                    target.setDatasetId( (java.lang.String) value);
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance(java.lang.Object parent) {
+                return null;
+            }
+        };
+        desc.setHandler(handler);
+        desc.setMultivalued(false);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _datasetId
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        { //-- local scope
+            org.exolab.castor.xml.validators.StringValidator typeValidator;
+            typeValidator = new org.exolab.castor.xml.validators.StringValidator();
+            fieldValidator.setValidator(typeValidator);
+            typeValidator.setWhiteSpace("preserve");
+        }
+        desc.setValidator(fieldValidator);
         //-- initialize element descriptors
         
         //-- _sequenceList
@@ -230,6 +267,48 @@ public class SequenceSetDescriptor extends org.exolab.castor.xml.util.XMLClassDe
         { //-- local scope
         }
         desc.setValidator(fieldValidator);
+        //-- _alcodonFrameList
+        desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview.schemabinding.version2.AlcodonFrame.class, "_alcodonFrameList", "AlcodonFrame", org.exolab.castor.xml.NodeType.Element);
+        handler = new org.exolab.castor.xml.XMLFieldHandler() {
+            public java.lang.Object getValue( java.lang.Object object ) 
+                throws IllegalStateException
+            {
+                SequenceSet target = (SequenceSet) object;
+                return target.getAlcodonFrame();
+            }
+            public void setValue( java.lang.Object object, java.lang.Object value) 
+                throws IllegalStateException, IllegalArgumentException
+            {
+                try {
+                    SequenceSet target = (SequenceSet) object;
+                    target.addAlcodonFrame( (jalview.schemabinding.version2.AlcodonFrame) value);
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public void resetValue(Object object) throws IllegalStateException, IllegalArgumentException {
+                try {
+                    SequenceSet target = (SequenceSet) object;
+                    target.removeAllAlcodonFrame();
+                } catch (java.lang.Exception ex) {
+                    throw new IllegalStateException(ex.toString());
+                }
+            }
+            public java.lang.Object newInstance(java.lang.Object parent) {
+                return new jalview.schemabinding.version2.AlcodonFrame();
+            }
+        };
+        desc.setHandler(handler);
+        desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
+        desc.setMultivalued(true);
+        addFieldDescriptor(desc);
+        
+        //-- validation code for: _alcodonFrameList
+        fieldValidator = new org.exolab.castor.xml.FieldValidator();
+        fieldValidator.setMinOccurs(0);
+        { //-- local scope
+        }
+        desc.setValidator(fieldValidator);
     }