X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FAnnotationColourGradient.java;h=36c1f958e3a3a055a6a42c096d9683d1000ea81a;hb=b7fc886ae65afa1c41430e59ba1fcd3ff86adf4b;hp=57cd1fa728b9f45ae44695b4117f7f02a6754aed;hpb=506d60f0e188723ddc91c26824b41ac7034df3fe;p=jalview.git diff --git a/src/jalview/schemes/AnnotationColourGradient.java b/src/jalview/schemes/AnnotationColourGradient.java index 57cd1fa..36c1f95 100755 --- a/src/jalview/schemes/AnnotationColourGradient.java +++ b/src/jalview/schemes/AnnotationColourGradient.java @@ -1,20 +1,19 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4) - * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6) + * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation; either version 2 - * of the License, or (at your option) any later version. + * This file is part of Jalview. * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. * - * You should have received a copy of the GNU General Public License - * along with this program; if not, write to the Free Software - * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License along with Jalview. If not, see . */ package jalview.schemes; @@ -24,11 +23,11 @@ import jalview.datamodel.*; public class AnnotationColourGradient extends ResidueColourScheme { - public static int NO_THRESHOLD = -1; + public static final int NO_THRESHOLD = -1; - public static int BELOW_THRESHOLD = 0; + public static final int BELOW_THRESHOLD = 0; - public static int ABOVE_THRESHOLD = 1; + public static final int ABOVE_THRESHOLD = 1; public AlignmentAnnotation annotation; @@ -134,7 +133,7 @@ public class AnnotationColourGradient extends ResidueColourScheme * DOCUMENT ME! * * @param n - * DOCUMENT ME! + * DOCUMENT ME! * * @return DOCUMENT ME! */ @@ -147,9 +146,9 @@ public class AnnotationColourGradient extends ResidueColourScheme * DOCUMENT ME! * * @param n - * DOCUMENT ME! + * DOCUMENT ME! * @param j - * DOCUMENT ME! + * DOCUMENT ME! * * @return DOCUMENT ME! */