X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FAnnotationColourGradient.java;h=6c46d0e3c12e3f99dfb43835e7b795b91cf56f13;hb=9f8bf271ad5f321799e1c2fd771d63118e7aeb43;hp=36c1f958e3a3a055a6a42c096d9683d1000ea81a;hpb=153dd62dc91da13ae732600e6ea55ddbe15eab39;p=jalview.git diff --git a/src/jalview/schemes/AnnotationColourGradient.java b/src/jalview/schemes/AnnotationColourGradient.java index 36c1f95..6c46d0e 100755 --- a/src/jalview/schemes/AnnotationColourGradient.java +++ b/src/jalview/schemes/AnnotationColourGradient.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6) - * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) + * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle * * This file is part of Jalview. * @@ -17,9 +17,11 @@ */ package jalview.schemes; -import java.awt.*; +import jalview.datamodel.AlignmentAnnotation; +import jalview.datamodel.GraphLine; +import jalview.datamodel.SequenceI; -import jalview.datamodel.*; +import java.awt.Color; public class AnnotationColourGradient extends ResidueColourScheme { @@ -152,7 +154,8 @@ public class AnnotationColourGradient extends ResidueColourScheme * * @return DOCUMENT ME! */ - public Color findColour(char c, int j) + @Override + public Color findColour(char c, int j, SequenceI seq) { Color currentColour = Color.white; @@ -202,7 +205,7 @@ public class AnnotationColourGradient extends ResidueColourScheme if (colourScheme != null) { - currentColour = colourScheme.findColour(c, j); + currentColour = colourScheme.findColour(c, j, seq); } else if (range != 0) {