X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FBlosum62ColourScheme.java;h=ad0e0c0bc1306509c71f67127aa4b3a6ac41744b;hb=dfa04e77181fccfa6229ffef1591fc9c622d9b39;hp=e9ac579d1febe3b0c5e75c6da7e0f4e0b07ca023;hpb=797df64fa2a0a30773d0f48f5494d4155e5a8be3;p=jalview.git diff --git a/src/jalview/schemes/Blosum62ColourScheme.java b/src/jalview/schemes/Blosum62ColourScheme.java index e9ac579..ad0e0c0 100755 --- a/src/jalview/schemes/Blosum62ColourScheme.java +++ b/src/jalview/schemes/Blosum62ColourScheme.java @@ -1,25 +1,27 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) - * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1) + * Copyright (C) 2014 The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - * + * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.schemes; -import java.awt.*; +import jalview.analysis.AAFrequency; -import jalview.analysis.*; +import java.awt.Color; +import jalview.datamodel.SequenceI; public class Blosum62ColourScheme extends ResidueColourScheme { @@ -28,7 +30,8 @@ public class Blosum62ColourScheme extends ResidueColourScheme super(); } - public Color findColour(char res, int j) + @Override + public Color findColour(char res, int j, SequenceI seq) { if ('a' <= res && res <= 'z') {