X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FBlosum62ColourScheme.java;h=f35b886cac6a80aff32e8240df1febae4e51975c;hb=eeb9907df14f1015db254a87bcc8db35e10ba02d;hp=53670e3bcd5d8f9d86c7b6ddf07fe560c5377010;hpb=8e1be43e250107a4d86898bd554cf03098fa5957;p=jalview.git

diff --git a/src/jalview/schemes/Blosum62ColourScheme.java b/src/jalview/schemes/Blosum62ColourScheme.java
index 53670e3..f35b886 100755
--- a/src/jalview/schemes/Blosum62ColourScheme.java
+++ b/src/jalview/schemes/Blosum62ColourScheme.java
@@ -54,10 +54,9 @@ public class Blosum62ColourScheme extends ResidueColourScheme
           String consensusResidue, float pid)
   {
     /*
-     * compare as upper case; note toUpperCase does nothing 
-     * if the string is already uppercase
+     * compare as upper case; note consensusResidue is 
+     * always computed as uppercase
      */
-    consensusResidue = consensusResidue.toUpperCase();
     if ('a' <= res && res <= 'z')
     {
       res -= ('a' - 'A');