X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FBuriedColourScheme.java;h=290ace89aabb0ec7a05d91e9a56977d14f361a67;hb=1d0f5219658cdf6ad5e1a1cbe6e1bb8cd12e6d85;hp=758618e29de252468c2bfff1cd1013b2b090d176;hpb=c19d2a91ca05e052e3408bf5852d88eb5d0608f1;p=jalview.git diff --git a/src/jalview/schemes/BuriedColourScheme.java b/src/jalview/schemes/BuriedColourScheme.java index 758618e..290ace8 100755 --- a/src/jalview/schemes/BuriedColourScheme.java +++ b/src/jalview/schemes/BuriedColourScheme.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b2) - * Copyright (C) 2015 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -20,7 +20,13 @@ */ package jalview.schemes; +import jalview.api.AlignViewportI; +import jalview.datamodel.AnnotatedCollectionI; +import jalview.datamodel.SequenceCollectionI; +import jalview.datamodel.SequenceI; + import java.awt.Color; +import java.util.Map; /** * DOCUMENT ME! @@ -47,8 +53,33 @@ public class BuriedColourScheme extends ScoreColourScheme * * @return DOCUMENT ME! */ + @Override public Color makeColour(float c) { return new Color(0, (float) (1.0 - c), c); } + + @Override + public boolean isPeptideSpecific() + { + return true; + } + + @Override + public String getSchemeName() + { + return JalviewColourScheme.Buried.toString(); + } + + /** + * Returns a new instance of this colour scheme with which the given data may + * be coloured + */ + @Override + public ColourSchemeI getInstance(AlignViewportI view, + AnnotatedCollectionI coll, + Map hrs) + { + return new BuriedColourScheme(); + } }