X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FClustalxColourScheme.java;h=6eb2ac1ef3b98862193381831be86d3c1a7dd0d0;hb=ab43013b7e357b84b4abade0dba949668dfb2a0e;hp=77d7e5be939cf2742e60756a2a65ddbc805dcd3b;hpb=50eb1f492f5c64b56594ee49be8183fab8a2f73b;p=jalview.git
diff --git a/src/jalview/schemes/ClustalxColourScheme.java b/src/jalview/schemes/ClustalxColourScheme.java
index 77d7e5b..6eb2ac1 100755
--- a/src/jalview/schemes/ClustalxColourScheme.java
+++ b/src/jalview/schemes/ClustalxColourScheme.java
@@ -1,19 +1,21 @@
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
* Copyright (C) 2014 The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.schemes;
@@ -327,11 +329,13 @@ public class ClustalxColourScheme extends ResidueColourScheme // implements
{
this.includeGaps = includeGaps;
}
+
@Override
public ColourSchemeI applyTo(AnnotatedCollectionI sg,
Map hiddenRepSequences)
{
- ClustalxColourScheme css= new ClustalxColourScheme(sg, hiddenRepSequences);
+ ClustalxColourScheme css = new ClustalxColourScheme(sg,
+ hiddenRepSequences);
css.includeGaps = includeGaps;
return css;
}