X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FClustalxColourScheme.java;h=8822567b18300530ea4efd5ef01d7ff1de928eba;hb=c0c7c514f4195237872a668cdccd20e0a747f7a1;hp=c99d3e410beee329d8df4a156f052514290c9296;hpb=92fa0de6fedeab36ad3290152e8290ceb07ab145;p=jalview.git diff --git a/src/jalview/schemes/ClustalxColourScheme.java b/src/jalview/schemes/ClustalxColourScheme.java index c99d3e4..8822567 100755 --- a/src/jalview/schemes/ClustalxColourScheme.java +++ b/src/jalview/schemes/ClustalxColourScheme.java @@ -1,5 +1,5 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5) + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6) * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle * * This file is part of Jalview. @@ -51,9 +51,7 @@ public class ClustalxColourScheme extends ResidueColourScheme // implements colhash.put("ORANGE", new Color((float) 0.9, (float) 0.6, (float) 0.3)); colhash.put("CYAN", new Color((float) 0.1, (float) 0.7, (float) 0.7)); colhash.put("PINK", new Color((float) 0.9, (float) 0.5, (float) 0.5)); - colhash - .put("MAGENTA", - new Color((float) 0.8, (float) 0.3, (float) 0.8)); + colhash.put("MAGENTA", new Color((float) 0.8, (float) 0.3, (float) 0.8)); colhash.put("YELLOW", new Color((float) 0.8, (float) 0.8, (float) 0.0)); } @@ -216,7 +214,7 @@ public class ClustalxColourScheme extends ResidueColourScheme // implements tmp6[0] = conses[3]; // - tmp6[1] = conses[29]; // D tmp6[2] = conses[10]; // E - tmp6[3] = conses[6]; // QE + tmp6[3] = conses[6]; // QE tmp6[4] = conses[19]; // Q tmp6[5] = conses[2]; // DE colours[5] = new ConsensusColour((Color) colhash.get("MAGENTA"), tmp6);