X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FColourSchemeI.java;h=c56b1bbcd39bb55364ffb5e852602acb29ec12a4;hb=23a5ed32b702d4d3682b8cdc8fd8e3f238202f7d;hp=9ebe7913a8f0880f608649f8f97f060a8695580d;hpb=a79f9e113c51c032070c670e45ce3eb464691166;p=jalview.git

diff --git a/src/jalview/schemes/ColourSchemeI.java b/src/jalview/schemes/ColourSchemeI.java
index 9ebe791..c56b1bb 100755
--- a/src/jalview/schemes/ColourSchemeI.java
+++ b/src/jalview/schemes/ColourSchemeI.java
@@ -18,8 +18,12 @@
 package jalview.schemes;
 
 import java.awt.Color;
+import java.util.Map;
 
+import jalview.datamodel.AlignmentI;
 import jalview.datamodel.AnnotatedCollectionI;
+import jalview.datamodel.SequenceCollectionI;
+import jalview.datamodel.SequenceGroup;
 import jalview.datamodel.SequenceI;
 
 public interface ColourSchemeI
@@ -42,6 +46,6 @@ public interface ColourSchemeI
 
   public void setThreshold(int ct, boolean ignoreGaps);
 
-  public void alignmentChanged(AnnotatedCollectionI alignment);
+  public void alignmentChanged(AnnotatedCollectionI alignment, Map<SequenceI, SequenceCollectionI> hiddenReps);
 
 }