X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FHmmerColourScheme.java;h=05c9b66f7e62004094e6cd00256bd2c93639b59e;hb=d71391d37943d1f6a5bf0af74996229f4d290cb0;hp=0f81ec1f35f398105067abd21437c64ac40ea84e;hpb=5e22c6b15dc429055036c19fcfc48c16d37d7ad0;p=jalview.git diff --git a/src/jalview/schemes/HmmerColourScheme.java b/src/jalview/schemes/HmmerColourScheme.java index 0f81ec1..05c9b66 100644 --- a/src/jalview/schemes/HmmerColourScheme.java +++ b/src/jalview/schemes/HmmerColourScheme.java @@ -1,8 +1,8 @@ package jalview.schemes; +import jalview.api.AlignViewportI; import jalview.datamodel.AnnotatedCollectionI; import jalview.datamodel.HiddenMarkovModel; -import jalview.datamodel.SequenceCollectionI; import jalview.datamodel.SequenceI; import jalview.util.ColorUtils; import jalview.util.Comparison; @@ -145,8 +145,8 @@ public abstract class HmmerColourScheme extends ResidueColourScheme * in ac that has an HMM */ @Override - public ColourSchemeI getInstance(AnnotatedCollectionI ac, - Map hiddenRepSequences) + public ColourSchemeI getInstance(AlignViewportI viewport, + AnnotatedCollectionI ac) { return newInstance(ac); }