X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FHydrophobicColourScheme.java;h=69af3c94e44da2c80619ce5876700a9cf548ab32;hb=136c0793b90b72b928c4d77dc109dd5c644e00d3;hp=5e3dd4400ef4616849cae9e62a05ab28f39a8d6e;hpb=838e4f91d4a53dd315640dbc9ff6ef7a815ee576;p=jalview.git diff --git a/src/jalview/schemes/HydrophobicColourScheme.java b/src/jalview/schemes/HydrophobicColourScheme.java index 5e3dd44..69af3c9 100755 --- a/src/jalview/schemes/HydrophobicColourScheme.java +++ b/src/jalview/schemes/HydrophobicColourScheme.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1) - * Copyright (C) 2015 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -20,7 +20,12 @@ */ package jalview.schemes; +import jalview.datamodel.AnnotatedCollectionI; +import jalview.datamodel.SequenceCollectionI; +import jalview.datamodel.SequenceI; + import java.awt.Color; +import java.util.Map; /** * DOCUMENT ME! @@ -47,8 +52,32 @@ public class HydrophobicColourScheme extends ScoreColourScheme * * @return DOCUMENT ME! */ + @Override public Color makeColour(float c) { return new Color(c, (float) 0.0, (float) 1.0 - c); } + + @Override + public boolean isPeptideSpecific() + { + return true; + } + + @Override + public String getSchemeName() + { + return JalviewColourScheme.Hydrophobic.toString(); + } + + /** + * Returns a new instance of this colour scheme with which the given data may + * be coloured + */ + @Override + public ColourSchemeI getInstance(AnnotatedCollectionI coll, + Map hrs) + { + return new HydrophobicColourScheme(); + } }