X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FNucleotideColourScheme.java;h=6aaef7dfc707b71eadb992cbfce7cba96a7384fe;hb=e760a92aa57282a2ea3892656e12f03d45e60cf6;hp=9768d9a34f7421e62af65a93795869275e7ea49b;hpb=174230b4233d9ce80f94527768d2cd2f76da11ab;p=jalview.git

diff --git a/src/jalview/schemes/NucleotideColourScheme.java b/src/jalview/schemes/NucleotideColourScheme.java
index 9768d9a..6aaef7d 100755
--- a/src/jalview/schemes/NucleotideColourScheme.java
+++ b/src/jalview/schemes/NucleotideColourScheme.java
@@ -47,7 +47,7 @@ public class NucleotideColourScheme extends ResidueColourScheme
     public Color findColour(String n)
     {
         // System.out.println("called"); log.debug
-        return colors[((Integer) (ResidueProperties.nucleotideHash.get(n))).intValue()];
+        return colors[ResidueProperties.nucleotideIndex[n.charAt(0)]];
     }
 
     /**
@@ -64,7 +64,7 @@ public class NucleotideColourScheme extends ResidueColourScheme
         {
             try
             {
-                currentColour = colors[((Integer) (ResidueProperties.nucleotideHash.get(n))).intValue()];
+                currentColour = colors[ ResidueProperties.nucleotideIndex[n.charAt(0)]];
             }
             catch (Exception ex)
             {