X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FPIDColourScheme.java;h=f213abecf18b6bf8192d60d254a24a144dbf3249;hb=424f6f03e8fb5e40cceca09fc8ffd72b41e3a9e4;hp=6ca1393f44656d77ba9277a7ad7283f3957731a3;hpb=a3fb8ffb6b29504b24717bf1dafc45d8f04abc67;p=jalview.git

diff --git a/src/jalview/schemes/PIDColourScheme.java b/src/jalview/schemes/PIDColourScheme.java
index 6ca1393..f213abe 100755
--- a/src/jalview/schemes/PIDColourScheme.java
+++ b/src/jalview/schemes/PIDColourScheme.java
@@ -31,16 +31,15 @@ import java.util.Map;
 
 public class PIDColourScheme extends ResidueColourScheme
 {
-  public Color[] pidColours;
+  private static final Color[] pidColours = { new Color(100, 100, 255),
+      new Color(153, 153, 255), new Color(204, 204, 255), };
 
-  public float[] thresholds;
+  private static final float[] thresholds = { 80, 60, 40, };
 
   SequenceGroup group;
 
   public PIDColourScheme()
   {
-    this.pidColours = ResidueProperties.pidColours;
-    this.thresholds = ResidueProperties.pidThresholds;
   }
 
   @Override
@@ -48,7 +47,7 @@ public class PIDColourScheme extends ResidueColourScheme
           String consensusResidue, float pid)
   {
     /*
-     * make everything uppercase; note this does nothing (fast)
+     * make everything uppercase; note this does nothing
      * if consensusResidue is already uppercase
      */
     consensusResidue = consensusResidue.toUpperCase();