X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FResidueColourScheme.java;h=3164748b4fccd0f373d81e94be3821b61ba1b7ab;hb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;hp=4eefcda4599c1d94cdd7d68d9679d386875a5c7f;hpb=b2f9a8d7bce642ff4011bc6d49e02bb0569fbb11;p=jalview.git diff --git a/src/jalview/schemes/ResidueColourScheme.java b/src/jalview/schemes/ResidueColourScheme.java index 4eefcda..3164748 100755 --- a/src/jalview/schemes/ResidueColourScheme.java +++ b/src/jalview/schemes/ResidueColourScheme.java @@ -1,19 +1,21 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.1) - * Copyright (C) 2014 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9) + * Copyright (C) 2015 The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.schemes; @@ -23,6 +25,7 @@ import jalview.analysis.Conservation; import jalview.datamodel.AnnotatedCollectionI; import jalview.datamodel.SequenceCollectionI; import jalview.datamodel.SequenceI; +import jalview.util.MessageManager; import java.awt.Color; import java.util.Hashtable; @@ -194,6 +197,7 @@ public class ResidueColourScheme implements ColourSchemeI { return conservationColouring; } + @Override public void setConservationApplied(boolean conservationApplied) { @@ -315,12 +319,14 @@ public class ResidueColourScheme implements ColourSchemeI public ColourSchemeI applyTo(AnnotatedCollectionI sg, Map hiddenRepSequences) { - try { + try + { return getClass().newInstance(); - } - catch (Exception q) + } catch (Exception q) { - throw new Error("Serious implementation error: cannot duplicate colourscheme "+getClass().getName(), q); + throw new Error(MessageManager.formatMessage( + "error.implementation_error_cannot_duplicate_colour_scheme", + new String[] { getClass().getName() }), q); } } }