X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FScoreColourScheme.java;h=8d7a45ace544bcee33d23bf5240dc2a6160f89cc;hb=c3c305755d392741176209a0274a47897ac4d8a8;hp=c11e1ecee6b18adcc25a1f55878a8262f8cde1b6;hpb=95a46891288f4fc63d690cab4f56879678f54fb6;p=jalview.git

diff --git a/src/jalview/schemes/ScoreColourScheme.java b/src/jalview/schemes/ScoreColourScheme.java
index c11e1ec..8d7a45a 100755
--- a/src/jalview/schemes/ScoreColourScheme.java
+++ b/src/jalview/schemes/ScoreColourScheme.java
@@ -1,6 +1,6 @@
 /*
 * Jalview - A Sequence Alignment Editor and Viewer
-* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+* Copyright (C) 2006 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
 *
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU General Public License
@@ -99,7 +99,7 @@ public class ScoreColourScheme extends ResidueColourScheme
             return Color.white;
         }
 
-        currentColour = colors[((Integer) ResidueProperties.aaHash.get(s)).intValue()];
+        currentColour = colors[ ResidueProperties.aaIndex[s.charAt(0)] ];
 
         if(conservationColouring)
          applyConservation(j);