X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fschemes%2FStrandColourScheme.java;h=5f11c29043ce12bd88e759dca78f37adc0da2186;hb=4d64932654de3f6ffe07db11d18f2d21f558c6e6;hp=9cf334006a25e896ba24f5b45fc3bfa304604384;hpb=59d682209891099d46b960509907c79e3fb276fe;p=jalview.git diff --git a/src/jalview/schemes/StrandColourScheme.java b/src/jalview/schemes/StrandColourScheme.java index 9cf3340..5f11c29 100755 --- a/src/jalview/schemes/StrandColourScheme.java +++ b/src/jalview/schemes/StrandColourScheme.java @@ -1,23 +1,31 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8) - * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.schemes; -import java.awt.*; +import jalview.datamodel.AnnotatedCollectionI; +import jalview.datamodel.SequenceCollectionI; +import jalview.datamodel.SequenceI; + +import java.awt.Color; +import java.util.Map; /** * DOCUMENT ME! @@ -44,8 +52,32 @@ public class StrandColourScheme extends ScoreColourScheme * * @return DOCUMENT ME! */ + @Override public Color makeColour(float c) { return new Color(c, c, (float) 1.0 - c); } + + @Override + public boolean isPeptideSpecific() + { + return true; + } + + @Override + public String getSchemeName() + { + return JalviewColourScheme.Strand.toString(); + } + + /** + * Returns a new instance of this colour scheme with which the given data may + * be coloured + */ + @Override + public ColourSchemeI getInstance(AnnotatedCollectionI coll, + Map hrs) + { + return new StrandColourScheme(); + } }