X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fstructure%2FSequenceListener.java;h=f8c5beaf67df08e8c12018d24e9b0fe8193035e9;hb=1f14c76854a077304c32c7bf3647a847469a36c6;hp=c44aa0baa444bdd2e74c7d4d2adacf8b0b154d1f;hpb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;p=jalview.git

diff --git a/src/jalview/structure/SequenceListener.java b/src/jalview/structure/SequenceListener.java
index c44aa0b..f8c5bea 100644
--- a/src/jalview/structure/SequenceListener.java
+++ b/src/jalview/structure/SequenceListener.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -20,6 +20,7 @@
  */
 package jalview.structure;
 
+import jalview.datamodel.SearchResultsI;
 import jalview.datamodel.SequenceI;
 
 public interface SequenceListener
@@ -27,7 +28,15 @@ public interface SequenceListener
   // TODO remove this? never called on SequenceListener type
   public void mouseOverSequence(SequenceI sequence, int index, int pos);
 
-  public void highlightSequence(jalview.datamodel.SearchResults results);
+  /**
+   * Highlights any position(s) represented by the search results and
+   * (optionally) returns an informative message about the position(s)
+   * higlighted
+   * 
+   * @param results
+   * @return
+   */
+  public String highlightSequence(SearchResultsI results);
 
   // TODO remove this? never called
   public void updateColours(SequenceI sequence, int index);