X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fstructure%2FStructureCommandsI.java;fp=src%2Fjalview%2Fstructure%2FStructureCommandsI.java;h=c8c8070f756614dca7c1e315d768093b10d32f45;hb=3459a8a691cb22508d7067f240b7254e588e77d3;hp=0489bdad27418c0f1603ca1c788f77c64cd3aca6;hpb=5b27f1062b2203c4c31702e205f4c78e1992063e;p=jalview.git
diff --git a/src/jalview/structure/StructureCommandsI.java b/src/jalview/structure/StructureCommandsI.java
index 0489bda..c8c8070 100644
--- a/src/jalview/structure/StructureCommandsI.java
+++ b/src/jalview/structure/StructureCommandsI.java
@@ -1,3 +1,23 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.structure;
import java.awt.Color;
@@ -86,7 +106,8 @@ public interface StructureCommandsI
*
* @param refAtoms
* @param atomSpec
- * @param backbone - superpose based on which kind of atomType
+ * @param backbone
+ * - superpose based on which kind of atomType
* @return
*/
List superposeStructures(AtomSpecModel refAtoms,
@@ -109,7 +130,11 @@ public interface StructureCommandsI
*/
StructureCommandI saveSession(String filepath);
- enum AtomSpecType { RESIDUE_ONLY, ALPHA, PHOSPHATE };
+ enum AtomSpecType
+ {
+ RESIDUE_ONLY, ALPHA, PHOSPHATE
+ };
+
/**
* Returns a representation of the atom set represented by the model, in
* viewer syntax format. If {@code alphaOnly} is true, this is restricted to