X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fstructure%2FStructureMappingcommandSet.java;h=9a39c10e3b5fd3b215fc452bd6dadedd38f284b5;hb=ad15cff29620f960119f80176f1fd443da9f6763;hp=5bf6e57c4be3c13e285fc06c3309c213ffae818c;hpb=ce89ec35928a6cb2f05a655c44c39a0249beb2d6;p=jalview.git

diff --git a/src/jalview/structure/StructureMappingcommandSet.java b/src/jalview/structure/StructureMappingcommandSet.java
index 5bf6e57..9a39c10 100644
--- a/src/jalview/structure/StructureMappingcommandSet.java
+++ b/src/jalview/structure/StructureMappingcommandSet.java
@@ -1,34 +1,62 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.structure;
 
-
 /**
  * holder for script commands generated for a particular structure mapping
+ * 
  * @author jimp
- *
+ * 
  */
-public class StructureMappingcommandSet {
+public class StructureMappingcommandSet
+{
   /**
    * structure file for which these commands were generated
    */
   public String mapping;
+
   /**
    * set of commands
    */
   public String[] commands;
+
   /**
-   * some object that indicates what the commands can be parsed by (eg JmolCommands.class implies these are Jmol commands)
+   * some object that indicates what the commands can be parsed by (eg
+   * JmolCommands.class implies these are Jmol commands)
    */
   public Object handledBy;
+
   /**
-   * record the originating command generator, the structure mapping involved, and the set of commands to be passed.
+   * record the originating command generator, the structure mapping involved,
+   * and the set of commands to be passed.
+   * 
    * @param handledBy
    * @param files
    * @param commands
    */
-  public StructureMappingcommandSet(Object handledBy, String files, String[] commands)
+  public StructureMappingcommandSet(Object handledBy, String files,
+          String[] commands)
   {
-    this.mapping=files;
-    this.handledBy=handledBy;
-    this.commands=commands;
+    this.mapping = files;
+    this.handledBy = handledBy;
+    this.commands = commands;
   }
 }