X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Futil%2FGroupUrlLink.java;h=af0b3083e0c039d77bcfccefa61988fb9ec30fb5;hb=HEAD;hp=bd375bb497861b0a30eda01460b76f34efd5b4d5;hpb=c932f0e85a8852824cdd8ce790af68682732c85c;p=jalview.git diff --git a/src/jalview/util/GroupUrlLink.java b/src/jalview/util/GroupUrlLink.java index bd375bb..af0b308 100644 --- a/src/jalview/util/GroupUrlLink.java +++ b/src/jalview/util/GroupUrlLink.java @@ -791,15 +791,16 @@ public class GroupUrlLink } else { - jalview.bin.Console.outPrintln("Created a url from " + ((int[]) url[0])[0] - + "out of " + idstring[0].length + " sequences."); + jalview.bin.Console + .outPrintln("Created a url from " + ((int[]) url[0])[0] + + "out of " + idstring[0].length + " sequences."); jalview.bin.Console.outPrintln("Sequences that did not match:"); for (int sq = 0; sq < idstring[0].length; sq++) { if (!((boolean[]) url[1])[sq]) { - jalview.bin.Console.outPrintln("Seq " + sq + ": " + idstring[0][sq] + "\t: " - + idstring[1][sq]); + jalview.bin.Console.outPrintln("Seq " + sq + ": " + + idstring[0][sq] + "\t: " + idstring[1][sq]); } } jalview.bin.Console.outPrintln("Sequences that DID match:"); @@ -807,8 +808,8 @@ public class GroupUrlLink { if (((boolean[]) url[1])[sq]) { - jalview.bin.Console.outPrintln("Seq " + sq + ": " + idstring[0][sq] + "\t: " - + idstring[1][sq]); + jalview.bin.Console.outPrintln("Seq " + sq + ": " + + idstring[0][sq] + "\t: " + idstring[1][sq]); } } jalview.bin.Console.outPrintln("The generated URL:"); @@ -853,8 +854,10 @@ public class GroupUrlLink jalview.bin.Console.outPrintln( "Link " + i + " " + links[i] + " : " + ul.toString()); jalview.bin.Console.outPrintln(" pref : " + ul.getUrl_prefix()); - jalview.bin.Console.outPrintln(" IdReplace : " + ul.getIDRegexReplace()); - jalview.bin.Console.outPrintln(" SeqReplace : " + ul.getSeqRegexReplace()); + jalview.bin.Console + .outPrintln(" IdReplace : " + ul.getIDRegexReplace()); + jalview.bin.Console + .outPrintln(" SeqReplace : " + ul.getSeqRegexReplace()); jalview.bin.Console.outPrintln(" Suffixes : " + ul.getUrl_suffix()); jalview.bin.Console.outPrintln( @@ -883,8 +886,8 @@ public class GroupUrlLink } else { - jalview.bin.Console.errPrintln("Invalid URLLink : " + links[i] + " : " - + ul.getInvalidMessage()); + jalview.bin.Console.errPrintln("Invalid URLLink : " + links[i] + + " : " + ul.getInvalidMessage()); } } }