X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Futil%2FJSONUtils.java;h=7a5fb15a389755ea2e37d070fe6ddf8a171f716b;hb=7c41e0253551a494219c4f1133a1aa2fe591b97a;hp=127a085d1739113cdfe450f94a51389e52c64273;hpb=b41e1c5deef715310a5b2c4c7dc9c4672dd46860;p=jalview.git

diff --git a/src/jalview/util/JSONUtils.java b/src/jalview/util/JSONUtils.java
index 127a085..7a5fb15 100644
--- a/src/jalview/util/JSONUtils.java
+++ b/src/jalview/util/JSONUtils.java
@@ -1,14 +1,29 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.util;
 
-import jalview.javascript.json.JSON;
-import jalview.json.binding.biojson.v1.AlignmentPojo;
-
-import java.io.FileReader;
 import java.io.IOException;
 import java.io.Reader;
 import java.util.List;
 
-import org.json.simple.parser.JSONParser;
 import org.json.simple.parser.ParseException;
 
 public class JSONUtils
@@ -23,70 +38,56 @@ public class JSONUtils
    */
   public static String arrayToStringList(List<Object> jsonArray)
   {
-	int n;
-	
+    int n;
+
     if (jsonArray == null || (n = jsonArray.size()) == 0)
     {
       return null;
     }
 
     /**
+     * BH TODO to Platform?
+     * 
      * @j2sNative
      * 
-     * return jsonArray.elementData.slice(0, n).join(",");
+     *            return jsonArray.elementData.slice(0, n).join(",");
      */
     {
-	    StringBuilder sb = new StringBuilder();
-	    for (int i = 0; i < n; i++)
-	    {
-	      if (i > 0)
-	      {
-	        sb.append(",");
-	      }
-	      sb.append(jsonArray.get(i).toString());
-	    }
-	    return sb.toString();
+      StringBuilder sb = new StringBuilder();
+      for (int i = 0; i < n; i++)
+      {
+        if (i > 0)
+        {
+          sb.append(",");
+        }
+        sb.append(jsonArray.get(i).toString());
+      }
+      return sb.toString();
     }
   }
 
   /**
-   * The method all JSON parsing must go through for JavaScript. 
-   * @param r a BufferedReader or a javascript.json.JSON.JSONReader
+   * The method all JSON parsing must go through for JavaScript.
+   * 
+   * @param r
+   *          a BufferedReader or a javascript.json.JSON.JSONReader
    * @return
    * @throws IOException
    * @throws ParseException
    */
-  public static Object parse(Reader r) throws IOException, ParseException 
+  public static Object parse(Reader r) throws IOException, ParseException
   {
-      // Using a file reader is not currently supported in SwingJS JavaScript
-
-	  if (r == null)
-		  return null;
-//	  
-//	  	Platform.timeCheck("JSONUtils.parse0 ", Platform.TIME_MARK);
-
-	Object ret;    
-	if (Platform.isJS()) 
-	{
-	  if (r instanceof FileReader) 
-	  {
-   	    throw new IOException("StringJS does not support FileReader parsing for JSON -- but it could...");
-	  }
-	  return JSON.parse(r);
-	} else {
- 	 ret = new JSONParser().parse(r);
-	}
-//  	Platform.timeCheck("JSONUtils.parse1 ", Platform.TIME_MARK);
- 	return ret;
+    return Platform.parseJSON(r);
   }
 
-  public static Object parse(String json) throws ParseException 
+  public static Object parse(String json) throws ParseException
   {
-	return (Platform.isJS() ? JSON.parse(json) : new JSONParser().parse(json));
+    return Platform.parseJSON(json);
   }
 
-public static String stringify(Object obj) {
-	return new org.json.JSONObject(obj).toString();
-}
+  public static String stringify(Object obj)
+  {
+    return new org.json.JSONObject(obj).toString();
+  }
 
 }