X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Futil%2FMappingUtils.java;h=6ddaa9947258d7094a4bf3cecaabf151c14695cb;hb=4924c107e70d763821067bcb3e1586bc14589918;hp=1f2e8dbd26633ed7baa6aa5e15544a47aca57f43;hpb=97a31ae1fe3095b9d332f655103e334342ee9a19;p=jalview.git

diff --git a/src/jalview/util/MappingUtils.java b/src/jalview/util/MappingUtils.java
index 1f2e8db..6ddaa99 100644
--- a/src/jalview/util/MappingUtils.java
+++ b/src/jalview/util/MappingUtils.java
@@ -284,9 +284,11 @@ public final class MappingUtils
             .getCodonFrames();
 
     /*
-     * Copy group name, colours, but not sequences
+     * Copy group name, name colours, but not sequences or sequence colour
+     * scheme
      */
     SequenceGroup mappedGroup = new SequenceGroup(sg);
+    sg.cs = mapTo.getGlobalColourScheme();
     mappedGroup.clear();
     // TODO set width of mapped group