X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Futil%2FPlatform.java;h=f9eb2a6bd853fc6087f933c1dab7bac58b416025;hb=6d9ff99acf35278e6dc1c85bbc65f8e419cd91b6;hp=c0c89669fa12f91341589180f3a35f363c5c89b2;hpb=577b0bf651763fe609eb6d6343754662023b3eac;p=jalview.git

diff --git a/src/jalview/util/Platform.java b/src/jalview/util/Platform.java
index c0c8966..f9eb2a6 100644
--- a/src/jalview/util/Platform.java
+++ b/src/jalview/util/Platform.java
@@ -305,9 +305,9 @@ public class Platform
     }
   }
 
-  public static void cacheFileData(String path, byte[] data)
+  public static void cacheFileData(String path, Object data)
   {
-    if (!isJS())
+    if (!isJS() || data == null)
     {
       return;
     }
@@ -319,6 +319,16 @@ public class Platform
      */
   }
 
+  public static void cacheFileData(File file)
+  {
+    byte[] data;
+    if (!isJS() || (data = Platform.getFileBytes(file)) == null)
+    {
+      return;
+    }
+    cacheFileData(file.toString(), data);
+  }
+
   public static byte[] getFileBytes(File f)
   {
     return /** @j2sNative f && f._bytes || */
@@ -327,15 +337,28 @@ public class Platform
 
   public static byte[] getFileAsBytes(String fileStr)
   {
+    byte[] bytes = null;
     // BH 2018 hack for no support for access-origin
-    return /** @j2sNative swingjs.JSUtil.getFileAsBytes$O(fileStr) || */
-    null;
+    /**
+     * @j2sNative bytes = swingjs.JSUtil.getFileAsBytes$O(fileStr)
+     */
+    cacheFileData(fileStr, bytes);
+    return bytes;
   }
 
-  public static String getFileAsString(String data)
+  @SuppressWarnings("unused")
+  public static String getFileAsString(String url)
   {
-    return /** @j2sNative swingjs.JSUtil.getFileAsString$S(data) || */
-    null;
+    String ret = null;
+    /**
+     * @j2sNative
+     * 
+     *            ret = swingjs.JSUtil.getFileAsString$S(url);
+     * 
+     * 
+     */
+    cacheFileData(url, ret);
+    return ret;
   }
 
   public static boolean setFileBytes(File f, String urlstring)
@@ -521,16 +544,17 @@ public class Platform
   public static void streamToFile(InputStream is, File outFile)
           throws IOException
   {
-    if (isJS() && /**
-                   * @j2sNative outFile.setBytes$O && outFile.setBytes$O(is) &&
-                   */
-            true)
-    {
-      return;
-    }
     FileOutputStream fio = new FileOutputStream(outFile);
     try
     {
+      if (isJS()
+              && /**
+                  * @j2sNative outFile.setBytes$O && outFile.setBytes$O(is) &&
+                  */
+              true)
+      {
+        return;
+      }
       byte[] bb = new byte[32 * 1024];
       int l;
       while ((l = is.read(bb)) > 0)
@@ -557,15 +581,34 @@ public class Platform
   public static void addJ2SDirectDatabaseCall(String domain)
   {
 
-    System.out.println(
-            "Platform adding no-access-control-allow-origin domain "
+    if (isJS())
+    {
+      System.out.println(
+            "Platform adding known access-control-allow-origin * for domain "
                     + domain);
+      /**
+       * @j2sNative
+       * 
+       *            J2S.addDirectDatabaseCall(domain);
+       */
+    }
+
+  }
+
+  public static void getURLCommandArguments()
+  {
 
     /**
-     * @j2sNative
+     * Retrieve the first query field as command arguments to Jalview. Include
+     * only if prior to "?j2s" or "&j2s" or "#". Assign the applet's __Info.args
+     * element to this value.
      * 
-     *            J2S.addDirectDatabaseCall(domain);
+     * @j2sNative var a =
+     *            decodeURI((document.location.href.replace("&","?").split("?j2s")[0]
+     *            + "?").split("?")[1].split("#")[0]); a &&
+     *            (J2S.thisApplet.__Info.args = a.split(" "));
      */
+
   }
 
 }