X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fviewmodel%2FAlignmentViewport.java;fp=src%2Fjalview%2Fviewmodel%2FAlignmentViewport.java;h=e0ffe331851775a1182369a4963b9f2740ba6c3e;hb=484abc22be60686d5188c8ff1b90613e821ea946;hp=1e65084fe4949a75fc2cbce764079c4cd76ec42a;hpb=2feac6dabe64b144783f8538fab352e987eadcb6;p=jalview.git

diff --git a/src/jalview/viewmodel/AlignmentViewport.java b/src/jalview/viewmodel/AlignmentViewport.java
index 1e65084..e0ffe33 100644
--- a/src/jalview/viewmodel/AlignmentViewport.java
+++ b/src/jalview/viewmodel/AlignmentViewport.java
@@ -1912,10 +1912,10 @@ public abstract class AlignmentViewport implements AlignViewportI,
   }
 
   /**
-   * If this is a protein alignment and there are mappings to cDNA, add the cDNA
-   * consensus annotation.
+   * If this is a protein alignment and there are mappings to cDNA, adds the
+   * cDNA consensus annotation and returns true, else returns false.
    */
-  public void initComplementConsensus()
+  public boolean initComplementConsensus()
   {
     if (!alignment.isNucleotide())
     {
@@ -1942,9 +1942,11 @@ public abstract class AlignmentViewport implements AlignViewportI,
                   "PID for cDNA", new Annotation[1], 0f, 100f,
                   AlignmentAnnotation.BAR_GRAPH);
           initConsensus(complementConsensus);
+          return true;
         }
       }
     }
+    return false;
   }
 
   private void initConsensus(AlignmentAnnotation aa)