X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fviewmodel%2FAlignmentViewport.java;h=315447e3178dab92d0f3775036e0b493cd49987c;hb=5bd245162908974e3c96329da6a803598341bae1;hp=899e8a7872378e10e5c66264e71ebda022f3da04;hpb=fd78187d73394a2a6358ba8666ba409ee51b59d5;p=jalview.git

diff --git a/src/jalview/viewmodel/AlignmentViewport.java b/src/jalview/viewmodel/AlignmentViewport.java
index 899e8a7..315447e 100644
--- a/src/jalview/viewmodel/AlignmentViewport.java
+++ b/src/jalview/viewmodel/AlignmentViewport.java
@@ -54,6 +54,7 @@ import jalview.viewmodel.styles.ViewStyle;
 import jalview.workers.AlignCalcManager;
 import jalview.workers.ComplementConsensusThread;
 import jalview.workers.ConsensusThread;
+import jalview.workers.ConservationThread;
 import jalview.workers.StrucConsensusThread;
 
 import java.awt.Color;
@@ -770,9 +771,9 @@ public abstract class AlignmentViewport implements AlignViewportI,
       return;
     }
     if (calculator
-            .getRegisteredWorkersOfClass(jalview.workers.ConservationThread.class) == null)
+.getRegisteredWorkersOfClass(ConservationThread.class) == null)
     {
-      calculator.registerWorker(new jalview.workers.ConservationThread(
+      calculator.registerWorker(new ConservationThread(
               this, ap));
     }
   }
@@ -1490,16 +1491,15 @@ public abstract class AlignmentViewport implements AlignViewportI,
 
 
   @Override
-  public jalview.datamodel.AlignmentView getAlignmentView(
-          boolean selectedOnly)
+  public AlignmentView getAlignmentView(boolean selectedOnly)
   {
     return getAlignmentView(selectedOnly, false);
   }
 
 
   @Override
-  public jalview.datamodel.AlignmentView getAlignmentView(
-          boolean selectedOnly, boolean markGroups)
+  public AlignmentView getAlignmentView(boolean selectedOnly,
+          boolean markGroups)
   {
     return new AlignmentView(alignment, colSel, selectionGroup,
             colSel != null && colSel.hasHiddenColumns(), selectedOnly,