X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fviewmodel%2FAlignmentViewport.java;h=a648b348efa986e239a00f56afdf26a39d267168;hb=17b7d054cf7faa5ee57ad8c8c4c9daa495d8cb35;hp=975b292d06f81348d3b5be7dd32031b5512c1c4d;hpb=5afdbcf85bf0a52dbb3124f47d05be659284c93c;p=jalview.git diff --git a/src/jalview/viewmodel/AlignmentViewport.java b/src/jalview/viewmodel/AlignmentViewport.java index 975b292..a648b34 100644 --- a/src/jalview/viewmodel/AlignmentViewport.java +++ b/src/jalview/viewmodel/AlignmentViewport.java @@ -50,6 +50,7 @@ import jalview.datamodel.AlignmentI; import jalview.datamodel.AlignmentView; import jalview.datamodel.Annotation; import jalview.datamodel.ColumnSelection; +import jalview.datamodel.ContactListI; import jalview.datamodel.HiddenColumns; import jalview.datamodel.HiddenSequences; import jalview.datamodel.ProfilesI; @@ -104,7 +105,7 @@ public abstract class AlignmentViewport /** * used to determine if quit should be confirmed */ - private boolean savedUpToDate = true; + private boolean savedUpToDate = false; /** * alignment displayed in the viewport. Please use get/setter @@ -2940,6 +2941,12 @@ public abstract class AlignmentViewport return searchResults; } + @Override + public ContactListI getContactList(AlignmentAnnotation _aa, int column) + { + return alignment.getContactListFor(_aa, column); + } + /** * get the consensus sequence as displayed under the PID consensus annotation * row.