X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fviewmodel%2FAlignmentViewport.java;h=a8c93cfff30874d881faa8c9f049cdf596d4dbf0;hb=4b7d3640209c4434d569c746672cf9eed4250ace;hp=a42a2a4fff04f57eedefd481c26ba8662601ebe7;hpb=5a166386ec498f9887de88dc3221fa48f9287d4c;p=jalview.git diff --git a/src/jalview/viewmodel/AlignmentViewport.java b/src/jalview/viewmodel/AlignmentViewport.java index a42a2a4..a8c93cf 100644 --- a/src/jalview/viewmodel/AlignmentViewport.java +++ b/src/jalview/viewmodel/AlignmentViewport.java @@ -51,6 +51,7 @@ import jalview.datamodel.AlignmentView; import jalview.datamodel.Annotation; import jalview.datamodel.ColumnSelection; import jalview.datamodel.ContactListI; +import jalview.datamodel.ContactMatrixI; import jalview.datamodel.HiddenColumns; import jalview.datamodel.HiddenSequences; import jalview.datamodel.ProfilesI; @@ -2948,6 +2949,13 @@ public abstract class AlignmentViewport return alignment.getContactListFor(_aa, column); } + @Override + public ContactMatrixI getContactMatrix( + AlignmentAnnotation alignmentAnnotation) + { + return alignment.getContactMatrixFor(alignmentAnnotation); + } + /** * get the consensus sequence as displayed under the PID consensus annotation * row.