X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fworkers%2FAnnotationWorker.java;h=8f37f15e7377bba0153d42203846bee11bab188c;hb=da09a965dd227e2d03d0f8f3ead720bf4f918d9b;hp=4d81307a2a6598d97cd39b1a03312832428858b6;hpb=6d2246e02a1232760ec873f9b6ee4a775c6b4b7d;p=jalview.git

diff --git a/src/jalview/workers/AnnotationWorker.java b/src/jalview/workers/AnnotationWorker.java
index 4d81307..8f37f15 100644
--- a/src/jalview/workers/AnnotationWorker.java
+++ b/src/jalview/workers/AnnotationWorker.java
@@ -47,11 +47,11 @@ class AnnotationWorker extends AlignCalcWorker
    * @param af
    * @param counter
    */
-  public AnnotationWorker(AlignViewportI viewport,
-          AlignmentViewPanel panel, AnnotationProviderI counter)
+  public AnnotationWorker(AlignViewportI viewport, AlignmentViewPanel panel,
+          AnnotationProviderI counter)
   {
     super(viewport, panel);
-    ourAnnots = new ArrayList<AlignmentAnnotation>();
+    ourAnnots = new ArrayList<>();
     this.counter = counter;
     calcMan.registerWorker(this);
   }
@@ -121,7 +121,10 @@ class AnnotationWorker extends AlignCalcWorker
     if (ap != null)
     {
       ap.adjustAnnotationHeight();
-      ap.paintAlignment(true);
+      // TODO: only need to update colour and geometry if panel height changes
+      // and view is coloured by annotation, and the annotation is actually
+      // changed!
+      ap.paintAlignment(true, true);
     }
   }