X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fworkers%2FConservationThread.java;h=5c303fd4449dd8aa1b2c3f08df1fc4c79f94d974;hb=6d2246e02a1232760ec873f9b6ee4a775c6b4b7d;hp=d98f42c5640267b2e857331f623f3ace0820cca8;hpb=ab43013b7e357b84b4abade0dba949668dfb2a0e;p=jalview.git diff --git a/src/jalview/workers/ConservationThread.java b/src/jalview/workers/ConservationThread.java index d98f42c..5c303fd 100644 --- a/src/jalview/workers/ConservationThread.java +++ b/src/jalview/workers/ConservationThread.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1) - * Copyright (C) 2014 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -21,7 +21,6 @@ package jalview.workers; import jalview.analysis.Conservation; -import jalview.api.AlignCalcWorkerI; import jalview.api.AlignViewportI; import jalview.api.AlignmentViewPanel; import jalview.datamodel.AlignmentAnnotation; @@ -30,8 +29,7 @@ import jalview.datamodel.AlignmentI; import java.util.ArrayList; import java.util.List; -public class ConservationThread extends AlignCalcWorker implements - AlignCalcWorkerI +public class ConservationThread extends AlignCalcWorker { private int ConsPercGaps = 25; // JBPNote : This should be a configurable @@ -110,7 +108,7 @@ public class ConservationThread extends AlignCalcWorker implements } catch (OutOfMemoryError error) { ap.raiseOOMWarning("calculating conservation", error); - calcMan.workerCannotRun(this); + calcMan.disableWorker(this); // alignViewport.conservation = null; // this.alignViewport.quality = null;