X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2FAWsJob.java;h=4a9cb74e9cd6c1274d12f859eb0a58cec76cc87d;hb=02c1474aa3b80a034a475edd9dc77fe8928ad1f1;hp=2f036bfc48591a3b624cc3dee6c8579bef9f8a3c;hpb=39c0b5e5d2ff4352d36bb6705121dc5ed14ba81b;p=jalview.git
diff --git a/src/jalview/ws/AWsJob.java b/src/jalview/ws/AWsJob.java
index 2f036bf..4a9cb74 100644
--- a/src/jalview/ws/AWsJob.java
+++ b/src/jalview/ws/AWsJob.java
@@ -1,5 +1,32 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
package jalview.ws;
+import jalview.ws.params.ArgumentI;
+import jalview.ws.params.WsParamSetI;
+
+import java.util.Hashtable;
+import java.util.List;
+import java.util.Map;
+
/**
* Generic properties for an individual job within a Web Service Client thread.
* Derived from jalview web services version 1 statuses, and revised for Jws2.
@@ -12,7 +39,8 @@ public abstract class AWsJob
protected String jobId;
/**
- * @param jobId the jobId to set
+ * @param jobId
+ * the jobId to set
*/
public void setJobId(String jobId)
{
@@ -30,7 +58,8 @@ public abstract class AWsJob
int allowedServerExceptions = 3;
/**
- * @param allowedServerExceptions the allowedServerExceptions to set
+ * @param allowedServerExceptions
+ * the allowedServerExceptions to set
*/
public void setAllowedServerExceptions(int allowedServerExceptions)
{
@@ -44,7 +73,8 @@ public abstract class AWsJob
protected boolean submitted = false;
/**
- * @param jobnum the jobnum to set
+ * @param jobnum
+ * the jobnum to set
*/
public void setJobnum(int jobnum)
{
@@ -52,7 +82,8 @@ public abstract class AWsJob
}
/**
- * @param submitted the submitted to set
+ * @param submitted
+ * the submitted to set
*/
public void setSubmitted(boolean submitted)
{
@@ -60,7 +91,8 @@ public abstract class AWsJob
}
/**
- * @param subjobComplete the subjobComplete to set
+ * @param subjobComplete
+ * the subjobComplete to set
*/
public void setSubjobComplete(boolean subjobComplete)
{
@@ -120,6 +152,12 @@ public abstract class AWsJob
*/
protected boolean subjobComplete = false;
+ protected WsParamSetI preset = null;
+
+ protected List arguments = null;
+
+ protected Hashtable SeqNames = new Hashtable();
+
public AWsJob()
{
}
@@ -186,15 +224,63 @@ public abstract class AWsJob
abstract public String getStatus();
abstract public boolean hasResponse();
+
abstract public void clearResponse();
+
abstract public String getState();
+
/**
* generates response using the abstract service flags.
- * @return a standard state response
+ *
+ * @return a standard state response
*/
- protected String _defaultState() {
-
+ protected String _defaultState()
+ {
+
String state = "";
return state;
}
-}
\ No newline at end of file
+
+ public void setPreset(WsParamSetI jobpreset)
+ {
+ preset = jobpreset;
+ }
+
+ public void setArguments(List paramset)
+ {
+ arguments = paramset;
+
+ }
+
+ public boolean isPresetJob()
+ {
+ return preset!=null && arguments==null;
+ }
+
+ public List getArguments()
+ {
+ return arguments;
+ }
+
+ public WsParamSetI getPreset()
+ {
+ return preset;
+ }
+
+ long nextChunk = 0;
+
+ /**
+ * update the record of the last position in the log file read for this job
+ *
+ * @param nextChunk
+ */
+ public void setnextChunk(long nextChunk)
+ {
+ this.nextChunk = nextChunk;
+ }
+
+ public long getNextChunk()
+ {
+ return nextChunk;
+ }
+}