Title: MsaWServices
- * - *Description: Registry of MsaWSI style services
- * - *Copyright: Copyright (c) 2004
- * - *Company: Dundee University
- * - * @author not attributable - * @version 1.0 - */ -/** - * TODO: MsaWServices will be set from properties and be dynamically discovered. - */ -public class MsaWServices { - public static Hashtable info; - static - { - info = new Hashtable(); - info.put("ClustalWS", - new String[] - { - "http://www.compbio.dundee.ac.uk/JalviewWS/services/ClustalWS", - "ClustalW Alignment job", - "\"Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple" + - " sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice." - + " Nucleic Acids Research, submitted, June 1994." - }); - info.put("MuscleWS", - new String[] - { - "http://www.compbio.dundee.ac.uk/JalviewWS/services/MuscleWS", - "Muscle Alignment job", - "Edgar, Robert C. (2004), MUSCLE: multiple sequence alignment " - + - "with high accuracy and high throughput, Nucleic Acids Research 32(5), 1792-97." - }); - }; -} +/* +* Jalview - A Sequence Alignment Editor and Viewer +* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle +* +* This program is free software; you can redistribute it and/or +* modify it under the terms of the GNU General Public License +* as published by the Free Software Foundation; either version 2 +* of the License, or (at your option) any later version. +* +* This program is distributed in the hope that it will be useful, +* but WITHOUT ANY WARRANTY; without even the implied warranty of +* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +* GNU General Public License for more details. +* +* You should have received a copy of the GNU General Public License +* along with this program; if not, write to the Free Software +* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA +*/ +package jalview.ws; + +import java.util.Hashtable; + + +/** + *Title: MsaWServices
+ * + *Description: Registry of MsaWSI style services
+ * + *Copyright: Copyright (c) 2004
+ * + *Company: Dundee University
+ * + * @author not attributable + * @version 1.0 + */ +/** + * TODO: MsaWServices will be set from properties and be dynamically discovered. + */ +public class MsaWServices +{ + /** DOCUMENT ME!! */ + public static Hashtable info; + + static + { + info = new Hashtable(); + info.put("ClustalWS", + new String[] + { + "http://www.compbio.dundee.ac.uk/JalviewWS/services/ClustalWS", + "ClustalW Alignment job", + + "\"Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple" + + " sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice." + + " Nucleic Acids Research, 22 4673-4680" + }); + info.put("MuscleWS", + new String[] + { + "http://www.compbio.dundee.ac.uk/JalviewWS/services/MuscleWS", + "Muscle Alignment job", + + "Edgar, Robert C. (2004), MUSCLE: multiple sequence alignment " + + "with high accuracy and high throughput, Nucleic Acids Research 32(5), 1792-97." + }); + } +}