X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2FMsaWServices.java;h=84c07a2ca2e48ca499dabe577ea56b4f413ea759;hb=d31fcbf4f32ab6a6091b8162d46cb68072730dfd;hp=ac89f6835833464555d049c809c3d0cdf6d96df3;hpb=5ee77e927b5f7fc838eddb22da954c7df11fcf53;p=jalview.git diff --git a/src/jalview/ws/MsaWServices.java b/src/jalview/ws/MsaWServices.java index ac89f68..84c07a2 100755 --- a/src/jalview/ws/MsaWServices.java +++ b/src/jalview/ws/MsaWServices.java @@ -1,40 +1,40 @@ -/* -* Jalview - A Sequence Alignment Editor and Viewer -* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle -* -* This program is free software; you can redistribute it and/or -* modify it under the terms of the GNU General Public License -* as published by the Free Software Foundation; either version 2 -* of the License, or (at your option) any later version. -* -* This program is distributed in the hope that it will be useful, -* but WITHOUT ANY WARRANTY; without even the implied warranty of -* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -* GNU General Public License for more details. -* -* You should have received a copy of the GNU General Public License -* along with this program; if not, write to the Free Software -* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA +/* +* Jalview - A Sequence Alignment Editor and Viewer +* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle +* +* This program is free software; you can redistribute it and/or +* modify it under the terms of the GNU General Public License +* as published by the Free Software Foundation; either version 2 +* of the License, or (at your option) any later version. +* +* This program is distributed in the hope that it will be useful, +* but WITHOUT ANY WARRANTY; without even the implied warranty of +* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +* GNU General Public License for more details. +* +* You should have received a copy of the GNU General Public License +* along with this program; if not, write to the Free Software +* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA */ package jalview.ws; import java.util.Hashtable; -/** - *

Title: MsaWServices

- * - *

Description: Registry of MsaWSI style services

- * - *

Copyright: Copyright (c) 2004

- * - *

Company: Dundee University

- * - * @author not attributable - * @version 1.0 +/** + *

Title: MsaWServices

+ * + *

Description: Registry of MsaWSI style services

+ * + *

Copyright: Copyright (c) 2004

+ * + *

Company: Dundee University

+ * + * @author not attributable + * @version 1.0 */ -/** - * TODO: MsaWServices will be set from properties and be dynamically discovered. +/** + * TODO: MsaWServices will be set from properties and be dynamically discovered. */ public class MsaWServices { public static Hashtable info; @@ -45,16 +45,16 @@ public class MsaWServices { new String[] { "http://www.compbio.dundee.ac.uk/JalviewWS/services/ClustalWS", "ClustalW Alignment job", - + "\"Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple" + " sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice." + - " Nucleic Acids Research, submitted, June 1994." + " Nucleic Acids Research, 22 4673-4680" }); info.put("MuscleWS", new String[] { "http://www.compbio.dundee.ac.uk/JalviewWS/services/MuscleWS", "Muscle Alignment job", - + "Edgar, Robert C. (2004), MUSCLE: multiple sequence alignment " + "with high accuracy and high throughput, Nucleic Acids Research 32(5), 1792-97." });