X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2FSequenceFetcher.java;h=14b69972a1276bd20bff2ac2425acb3c1103549f;hb=c330d4dad8fc78c8ec1d5c35e5fc137836c9776d;hp=111c5104ef64a9d3b08d8d362e2d038b3624bc2f;hpb=a049d57f4693f1b60ab02fdf2c9403a2e9c59444;p=jalview.git

diff --git a/src/jalview/ws/SequenceFetcher.java b/src/jalview/ws/SequenceFetcher.java
index 111c510..14b6997 100644
--- a/src/jalview/ws/SequenceFetcher.java
+++ b/src/jalview/ws/SequenceFetcher.java
@@ -1,20 +1,20 @@
-/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
- * 
- * This file is part of Jalview.
- * 
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- * 
- * Jalview is distributed in the hope that it will be useful, but 
- * WITHOUT ANY WARRANTY; without even the implied warranty 
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
- * PURPOSE.  See the GNU General Public License for more details.
- * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
- */
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
+ * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ */
 package jalview.ws;
 
 import jalview.datamodel.Alignment;
@@ -22,7 +22,6 @@ import jalview.datamodel.AlignmentI;
 import jalview.datamodel.DBRefSource;
 import jalview.datamodel.SequenceI;
 import jalview.ws.dbsources.das.api.jalviewSourceI;
-import jalview.ws.dbsources.das.datamodel.DasSequenceSource;
 import jalview.ws.seqfetcher.ASequenceFetcher;
 import jalview.ws.seqfetcher.DbSourceProxy;
 
@@ -79,15 +78,18 @@ public class SequenceFetcher extends ASequenceFetcher
     ArrayList<String> dassrc = new ArrayList<String>(), nondas = new ArrayList<String>();
     for (int i = 0; i < srcs.length; i++)
     {
-      boolean das = false,skip=false;
+      boolean das = false, skip = false;
       String nm;
       for (DbSourceProxy dbs : getSourceProxy(srcs[i]))
       {
-        // Skip the alignment databases for the moment - they're not useful for verifying a single sequence against its reference source
+        // Skip the alignment databases for the moment - they're not useful for
+        // verifying a single sequence against its reference source
         if (dbs.isA(DBRefSource.ALIGNMENTDB))
         {
-          skip=true;
-        } else {
+          skip = true;
+        }
+        else
+        {
           nm = dbs.getDbName();
           if (getSourceProxy(srcs[i]) instanceof jalview.ws.dbsources.das.datamodel.DasSequenceSource)
           {