X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2FSequenceFetcher.java;h=1f8c28ab32f0c27fc9d403b9186a59b45f2dbc68;hb=a3499f1eaaef8cc03aac19a28f960acd0fd70a04;hp=909f51560ae96e7dfe7dded5a86ea8829923b5a1;hpb=f9b80711054b61e8c2257488a1637e15616cb9c9;p=jalview.git diff --git a/src/jalview/ws/SequenceFetcher.java b/src/jalview/ws/SequenceFetcher.java index 909f515..1f8c28a 100644 --- a/src/jalview/ws/SequenceFetcher.java +++ b/src/jalview/ws/SequenceFetcher.java @@ -20,11 +20,8 @@ */ package jalview.ws; -import jalview.ext.ensembl.EnsemblCdna; -import jalview.ext.ensembl.EnsemblCds; import jalview.ext.ensembl.EnsemblGene; -import jalview.ext.ensembl.EnsemblGenome; -import jalview.ext.ensembl.EnsemblProtein; +import jalview.ext.ensembl.EnsemblGenomes; import jalview.ws.dbsources.EmblCdsSource; import jalview.ws.dbsources.EmblSource; import jalview.ws.dbsources.Pdb; @@ -42,9 +39,7 @@ import java.util.ArrayList; import java.util.List; /** - * This is the the concrete implementation of the sequence retrieval interface - * and abstract class in jalview.ws.seqfetcher. This implements the run-time - * discovery of sequence database clientss. + * This implements the run-time discovery of sequence database clients. * */ public class SequenceFetcher extends ASequenceFetcher @@ -62,11 +57,8 @@ public class SequenceFetcher extends ASequenceFetcher public SequenceFetcher(boolean addDas) { - addDBRefSourceImpl(EnsemblProtein.class); - addDBRefSourceImpl(EnsemblCds.class); - addDBRefSourceImpl(EnsemblGenome.class); addDBRefSourceImpl(EnsemblGene.class); - addDBRefSourceImpl(EnsemblCdna.class); + addDBRefSourceImpl(EnsemblGenomes.class); addDBRefSourceImpl(EmblSource.class); addDBRefSourceImpl(EmblCdsSource.class); addDBRefSourceImpl(Uniprot.class);