X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2FSequenceFetcher.java;h=4c22f11093e80b8ff380264fd384fc5ca6a048d0;hb=43de22c6192a7b45c09fc778aca530c6a1c6f70a;hp=1661acffb6166743b610897ccc8eeb88e3296d67;hpb=1104370854c88afc34b54efcb6d914e4309e8f4f;p=jalview.git diff --git a/src/jalview/ws/SequenceFetcher.java b/src/jalview/ws/SequenceFetcher.java index 1661acf..4c22f11 100644 --- a/src/jalview/ws/SequenceFetcher.java +++ b/src/jalview/ws/SequenceFetcher.java @@ -21,6 +21,7 @@ package jalview.ws; import jalview.ext.ensembl.EnsemblGene; +import jalview.ws.dbsources.EBIAlfaFold; import jalview.ws.dbsources.EmblCdsSource; import jalview.ws.dbsources.EmblSource; import jalview.ws.dbsources.Pdb; @@ -55,15 +56,20 @@ public class SequenceFetcher extends ASequenceFetcher addDBRefSourceImpl(EmblSource.class); addDBRefSourceImpl(EmblCdsSource.class); addDBRefSourceImpl(Uniprot.class); - addDBRefSourceImpl(TDBeacons.class); + // not a sequence source yet + // addDBRefSourceImpl(TDBeacons.class); addDBRefSourceImpl(Pdb.class); addDBRefSourceImpl(PfamFull.class); addDBRefSourceImpl(PfamSeed.class); addDBRefSourceImpl(RfamSeed.class); + // Technically not a database cross reference we fetch directly + // Useful for AlphaFold debugging + // addDBRefSourceImpl(EBIAlfaFold.class); } /** - * return an ordered list of database sources excluding alignment only databases + * return an ordered list of database sources excluding alignment only + * databases */ public String[] getNonAlignmentSources() {