X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2FSequenceFetcher.java;h=4c22f11093e80b8ff380264fd384fc5ca6a048d0;hb=bc1a3842b31a35a7794f4afec4911ad421c7c3e4;hp=a864ced04dc7b5206c90c37c49378bf96f251b6c;hpb=87a3bcf7d765b3c441c14171d70f197135622289;p=jalview.git diff --git a/src/jalview/ws/SequenceFetcher.java b/src/jalview/ws/SequenceFetcher.java index a864ced..4c22f11 100644 --- a/src/jalview/ws/SequenceFetcher.java +++ b/src/jalview/ws/SequenceFetcher.java @@ -28,6 +28,7 @@ import jalview.ws.dbsources.Pdb; import jalview.ws.dbsources.PfamFull; import jalview.ws.dbsources.PfamSeed; import jalview.ws.dbsources.RfamSeed; +import jalview.ws.dbsources.TDBeacons; import jalview.ws.dbsources.Uniprot; import jalview.ws.seqfetcher.ASequenceFetcher; import jalview.ws.seqfetcher.DbSourceProxy; @@ -55,15 +56,20 @@ public class SequenceFetcher extends ASequenceFetcher addDBRefSourceImpl(EmblSource.class); addDBRefSourceImpl(EmblCdsSource.class); addDBRefSourceImpl(Uniprot.class); + // not a sequence source yet + // addDBRefSourceImpl(TDBeacons.class); addDBRefSourceImpl(Pdb.class); addDBRefSourceImpl(PfamFull.class); addDBRefSourceImpl(PfamSeed.class); addDBRefSourceImpl(RfamSeed.class); - addDBRefSourceImpl(EBIAlfaFold.class); + // Technically not a database cross reference we fetch directly + // Useful for AlphaFold debugging + // addDBRefSourceImpl(EBIAlfaFold.class); } /** - * return an ordered list of database sources excluding alignment only databases + * return an ordered list of database sources excluding alignment only + * databases */ public String[] getNonAlignmentSources() {